RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 GATA1P15976 413 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-206ENST00000470241 NTF3P20783 257 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 CRYBA4P53673 196 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 ZFP2Q6ZN57 461 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 Q6ZSN1 163 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 NUP35Q8NFH5 326 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 ANAPC16Q96DE5 110 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 PRO0255Q9UI72 69 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 HHLA3Q9XRX5 114 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 KIF25-AS1Q9Y6Z4 181 aa7.38□□□□□ -1.23
SMC1A-206ENST00000470241 RHODO00212 210 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 MT-ND4LP03901 98 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 LINC00315P59091 139 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 SLAQ13239 276 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 TWIST1Q15672 202 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 FAM74A4Q5TZK3 123 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 C14orf178Q8N769 122 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-206ENST00000470241 AP1S3Q96PC3 154 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 NAT8BQ9UHF3 227 aa7.37□□□□□ -1.23
SMC1A-206ENST00000470241 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 H3BNG1 76 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 PAX4O43316 350 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 EVI2AP22794 236 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 TCTAP57738 103 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 NDUFA5Q16718 116 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 SLC25A29Q8N8R3 303 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 CLRN3Q8NCR9 226 aa7.36□□□□□ -1.23
SMC1A-206ENST00000470241 C7orf77A4D0Y5 90 aa7.35□□□□□ -1.23
SMC1A-206ENST00000470241 TRGC1P0CF51 173 aa7.35□□□□□ -1.23
SMC1A-206ENST00000470241 C15orf53Q8NAA6 179 aa7.35□□□□□ -1.23
SMC1A-206ENST00000470241 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
SMC1A-206ENST00000470241 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
SMC1A-206ENST00000470241 ALMS1Q8TCU4 4167 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 SACSQ9NZJ4 4579 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 DNAH1Q9P2D7 4330 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 NUDT3O95989 172 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 APOC3P02656 99 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 GYPEP15421 78 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 RAB4BP61018 213 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 RIGQ13278 110 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 Q9UF83 564 aa7.34□□□□□ -1.23
SMC1A-206ENST00000470241 A0A096LPF7 62 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 K7EQD1 137 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 MGPP08493 103 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 FAM3BP58499 235 aaPredicted RBP7.33□□□□□ -1.24
SMC1A-206ENST00000470241 RHEBQ15382 184 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 RHOHQ15669 191 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 ZNF56Q15929 161 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 SVBPQ8N300 66 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 DPH3P1Q9H4G8 78 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 VPS13DQ5THJ4 4388 aa7.33□□□□□ -1.24
SMC1A-206ENST00000470241 A0A087WWC5 75 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 A0A1B0GXF2 115 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 P0DMU3 169 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 FAM231AP0DMU4 169 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 FAM231CP0DMU5 169 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 LINC00694P0DN24 101 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 MRPL23Q16540 153 aaKnown RBP7.32□□□□□ -1.24
SMC1A-206ENST00000470241 SUMO4Q6EEV6 95 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 MRPL54Q6P161 138 aaKnown RBP7.32□□□□□ -1.24
SMC1A-206ENST00000470241 IMMP2LQ96T52 175 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 PRADC1Q9BSG0 188 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 RPS10P5Q9NQ39 176 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 TMEM242Q9NWH2 141 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 ICOSQ9Y6W8 199 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 NACAE9PAV3 2078 aa7.32□□□□□ -1.24
SMC1A-206ENST00000470241 GAGE12JA6NER3 117 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 F5H697 171 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 M0QY20 66 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 SNAPINO95295 136 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 SRIP30626 198 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 CAMPP49913 170 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 GAGE1Q13065 139 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 GAGE4Q13068 117 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 GAGE5Q13069 117 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 SMIM15Q7Z3B0 74 aa7.31□□□□□ -1.24
SMC1A-206ENST00000470241 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 A0A1B0GW15 77 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 HBBP68871 147 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 ESRGQ1W209 222 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 LGALS9CQ6DKI2 356 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 ATRAIDQ6UW56 229 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 ATP5L2Q7Z4Y8 100 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 LINC00476Q8WZB0 136 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
SMC1A-206ENST00000470241 KMT2CQ8NEZ4 4911 aaKnown RBP7.29□□□□□ -1.24
SMC1A-206ENST00000470241 TRAV26-2A0A0B4J265 109 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 RAB4AP20338 218 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 KCNIP4Q6PIL6 250 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 NEGR1Q7Z3B1 354 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 AMN1Q8IY45 258 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 BTF3L4Q96K17 158 aa7.29□□□□□ -1.24
SMC1A-206ENST00000470241 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms