RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 IMMP2LQ96T52 175 aa4.75□□□□□ -1.65
UBXN4-205ENST00000467065 C11orf68Q9H3H3 251 aaKnown RBP4.75□□□□□ -1.65
UBXN4-205ENST00000467065 MDFICQ9P1T7 246 aa4.75□□□□□ -1.65
UBXN4-205ENST00000467065 IGKV3D-20A0A0C4DH25 116 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 IGHV3-16A0A0C4DH30 117 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 C19orf71A6NCJ1 209 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 HIGD1CA8MV81 97 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 K7EN84 100 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 PPP1R17O96001 155 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 IGLV2-8P01709 118 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 GIG44P09565 113 aaPredicted RBP4.74□□□□□ -1.65
UBXN4-205ENST00000467065 OR5AL1P0C617 328 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 CRIP1P50238 77 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 S100A12P80511 92 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 RNF212Q495C1 297 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 PIK3CD-AS1Q5SR53 167 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 C10orf91Q5T1B1 145 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 FAM74A4Q5TZK3 123 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 LYZL1Q6UWQ5 148 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 CLRN3Q8NCR9 226 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 RNASE8Q8TDE3 154 aaKnown RBP4.74□□□□□ -1.65
UBXN4-205ENST00000467065 PHLDA1Q8WV24 401 aaPredicted RBP4.74□□□□□ -1.65
UBXN4-205ENST00000467065 AP1S3Q96PC3 154 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 PRADC1Q9BSG0 188 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 TMEM242Q9NWH2 141 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 TP53TG3Q9ULZ0 132 aa4.74□□□□□ -1.65
UBXN4-205ENST00000467065 DNAH6Q9C0G6 4158 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 A0A087WWC5 75 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 TRAV10A0A0B4J240 114 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 C7orf77A4D0Y5 90 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 NTF3P20783 257 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 DNLZQ5SXM8 178 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 PRR9Q5T870 116 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 Q8NAQ8 132 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 RASL10AQ92737 203 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 PTH2Q96A98 100 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 FAM210BQ96KR6 192 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 MRPL16Q9NX20 251 aaKnown RBP4.73□□□□□ -1.65
UBXN4-205ENST00000467065 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 HHLA3Q9XRX5 114 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 TMA7Q9Y2S6 64 aaKnown RBP4.73□□□□□ -1.65
UBXN4-205ENST00000467065 CARHSP1Q9Y2V2 147 aaKnown RBP4.73□□□□□ -1.65
UBXN4-205ENST00000467065 X6R8D5 127 aa4.73□□□□□ -1.65
UBXN4-205ENST00000467065 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 TRAV9-1A0A075B6T8 112 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 SPINK4O60575 86 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 MGPP08493 103 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 RBMY1A1P0DJD3 496 aaKnown RBP4.72□□□□□ -1.65
UBXN4-205ENST00000467065 RBMY1CP0DJD4 496 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 GZMBP10144 247 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 CAMPP49913 170 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 RBMY1FQ15415 496 aaKnown RBP4.72□□□□□ -1.65
UBXN4-205ENST00000467065 ZNF56Q15929 161 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 SH2D6Q7Z4S9 175 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 ATP5L2Q7Z4Y8 100 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
UBXN4-205ENST00000467065 MUC21A0A0G2JKD1 596 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 MUC21A0A140T8X8 626 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 PRM2P04554 102 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 FOXA3P55318 350 aaPredicted RBP4.71□□□□□ -1.66
UBXN4-205ENST00000467065 FAM3BP58499 235 aaPredicted RBP4.71□□□□□ -1.66
UBXN4-205ENST00000467065 HBBP68871 147 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 RASL11AQ6T310 242 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 ZFP2Q6ZN57 461 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 Q6ZTI0 123 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 C14orf178Q8N769 122 aaPredicted RBP4.71□□□□□ -1.66
UBXN4-205ENST00000467065 NUP35Q8NFH5 326 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 FRZBQ92765 325 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 PRO0255Q9UI72 69 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 CELA1Q9UNI1 258 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 URGCP-MRPS24S4R325 110 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 V9GYV3 84 aa4.71□□□□□ -1.66
UBXN4-205ENST00000467065 DNAH10Q8IVF4 4471 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 A0A087WWL8 130 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 IGLL5B9A064 214 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 SNAI2O43623 268 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 NUDT3O95989 172 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 PPBPP02775 128 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 RNASE3P12724 160 aaKnown RBP4.7□□□□□ -1.66
UBXN4-205ENST00000467065 CKS2P33552 79 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 TCTAP57738 103 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 RPL36AP83881 106 aaKnown RBP4.7□□□□□ -1.66
UBXN4-205ENST00000467065 RHOHQ15669 191 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
UBXN4-205ENST00000467065 Q6ZQT7 251 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 Q6ZTC4 211 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 C15orf53Q8NAA6 179 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 C11orf72Q8NBR9 251 aa4.7□□□□□ -1.66
UBXN4-205ENST00000467065 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
UBXN4-205ENST00000467065 C9orf85Q96MD7 179 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms