RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 IGHV4-34P06331 123 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 CKS2P33552 79 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 CRIP2P52943 208 aaPredicted RBP3.99□□□□□ -1.77
LRCH3-212ENST00000466845 GNB1P62873 340 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 RPL18Q07020 188 aaKnown RBP3.99□□□□□ -1.77
LRCH3-212ENST00000466845 RHOHQ15669 191 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 Q1T7F1 81 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 LINC00643Q86TS7 51 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 PDPNQ86YL7 162 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 CSNK1G2-AS1Q8NCQ2 148 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 CCL4L1Q8NHW4 92 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 CLEC2BQ92478 149 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
LRCH3-212ENST00000466845 PLXNA2O75051 1894 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 USP24Q9UPU5 2620 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 IGF2RP11717 2491 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 DSCAML1Q8TD84 2053 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 IGKV1-6A0A0C4DH72 117 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 FXYD1O00168 92 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 CPSF4O95639 269 aaKnown RBP3.98□□□□□ -1.77
LRCH3-212ENST00000466845 BGLAPP02818 100 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 ZNF56Q15929 161 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-212ENST00000466845 ZNF497Q6ZNH5 498 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 B9D2Q9BPU9 175 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 SLC50A1Q9BRV3 221 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 FAM103A1Q9BTL3 118 aaKnown RBP3.98□□□□□ -1.77
LRCH3-212ENST00000466845 GABARAPL1Q9H0R8 117 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 CSAG2Q9Y5P2 127 aa3.98□□□□□ -1.77
LRCH3-212ENST00000466845 PTPRBP23467 1997 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 C2orf70A6NJV1 201 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 C3orf84H3BNL1 204 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 PIRTP0C851 137 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 EGFEM1PQ0D2K5 195 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 ZNF791Q3KP31 576 aaPredicted RBP3.97□□□□□ -1.77
LRCH3-212ENST00000466845 PSMG4Q5JS54 123 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 SMIM4Q8WVI0 70 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 ZNF71Q9NQZ8 489 aaPredicted RBP3.97□□□□□ -1.77
LRCH3-212ENST00000466845 ARL2-SNX15V9GYD0 113 aa3.97□□□□□ -1.77
LRCH3-212ENST00000466845 KMT2BQ9UMN6 2715 aaPredicted RBP3.97□□□□□ -1.77
LRCH3-212ENST00000466845 COL5A1P20908 1838 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-212ENST00000466845 IGHV3OR15-7A0A075B7D8 119 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 IGHV1-24A0A0C4DH33 117 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 CXorf51AA0A1B0GTR3 108 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 TCRBV4S1A1TA0A5B7 111 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 PINLYPA6NC86 204 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 PCNX2A6NKB5 2137 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 KRTAP4-16G5E9R7 235 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-212ENST00000466845 H7BZZ5 65 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 J3QLW9 94 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 NDUFC1O43677 76 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 SAA1P0DJI8 122 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-212ENST00000466845 PIPP12273 146 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-212ENST00000466845 SDIM1Q6ZPB5 146 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 Q6ZRP5 223 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 CYP2G1PQ6ZSU1 146 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 MIR17HGQ75NE6 70 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 RMI2Q96E14 147 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 MRPL35Q9NZE8 188 aaKnown RBP3.96□□□□□ -1.78
LRCH3-212ENST00000466845 LAMA1P25391 3075 aa3.96□□□□□ -1.78
LRCH3-212ENST00000466845 DSCAMO60469 2012 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 FAM208BQ5VWN6 2430 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 A0A087X002 238 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 IGKV3D-20A0A0C4DH25 116 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 CRYM-AS1A6NIL9 109 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 COX7A1P24310 79 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 DYNLT1P63172 113 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 CYCSP99999 105 aaKnown RBP3.95□□□□□ -1.78
LRCH3-212ENST00000466845 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 S100A7L2Q5SY68 101 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 Q6P435 159 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 C6orf201Q7Z4U5 140 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 Q8N7P7 452 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 PPP1R1CQ8WVI7 109 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 ZNF524Q96C55 264 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 ATXN7L3BQ96GX2 97 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 CABIN1Q9Y6J0 2220 aa3.95□□□□□ -1.78
LRCH3-212ENST00000466845 KNL1Q8NG31 2342 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 ANKRD11Q6UB99 2663 aaPredicted RBP3.94□□□□□ -1.78
LRCH3-212ENST00000466845 PKD1L2Q7Z442 2459 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 IGLV3-12A0A075B6K2 115 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 SPTY2D1-AS1A0A0U1RR47 76 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 CYSRT1A8MQ03 144 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 GCHFRP30047 84 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 PEBP1P30086 187 aaKnown RBP3.94□□□□□ -1.78
LRCH3-212ENST00000466845 DEFB133Q30KQ1 61 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 NUP37Q8NFH4 326 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 TTTY13Q9BZ97 58 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 KIAA2026Q5HYC2 2103 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 AKAP13Q12802 2813 aa3.94□□□□□ -1.78
LRCH3-212ENST00000466845 PLXNB3Q9ULL4 1909 aa3.93□□□□□ -1.78
LRCH3-212ENST00000466845 GOLGA4Q13439 2230 aaKnown RBP3.93□□□□□ -1.78
LRCH3-212ENST00000466845 CHD6Q8TD26 2715 aa3.93□□□□□ -1.78
LRCH3-212ENST00000466845 IGHV3-74A0A0B4J1X5 117 aa3.93□□□□□ -1.78
LRCH3-212ENST00000466845 TRAV13-2A0A0B4J235 113 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms