RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SH2D1AO60880 128 aa12.69□□□□□ -0.38
COL9A3-206ENST00000466532 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
COL9A3-206ENST00000466532 MAP1LC3B2A6NCE7 125 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 C1QBP02746 253 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 UBE2G1P62253 170 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 FAM162BQ5T6X4 162 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 COX8CQ7Z4L0 72 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 MAP1LC3BQ9GZQ8 125 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 PHLDA3Q9Y5J5 127 aa12.68□□□□□ -0.38
COL9A3-206ENST00000466532 A0A087WWL8 130 aa12.67□□□□□ -0.38
COL9A3-206ENST00000466532 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
COL9A3-206ENST00000466532 URGCP-MRPS24S4R325 110 aa12.67□□□□□ -0.38
COL9A3-206ENST00000466532 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
COL9A3-206ENST00000466532 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
COL9A3-206ENST00000466532 M0R381 172 aa12.66□□□□□ -0.38
COL9A3-206ENST00000466532 ZNF674Q2M3X9 581 aa12.66□□□□□ -0.38
COL9A3-206ENST00000466532 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
COL9A3-206ENST00000466532 G3V3Q6 166 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 ARPC5O15511 151 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 LINC01559Q495D7 138 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 CST9LP1Q5W188 147 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 NIT1Q86X76 327 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 BAALCQ8WXS3 180 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 COX11Q9Y6N1 276 aa12.65□□□□□ -0.38
COL9A3-206ENST00000466532 TRBV6-1A0A0K0K1D8 114 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 LTAP01374 205 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 ZFP82Q8N141 532 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 STOML3Q8TAV4 291 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 RMI2Q96E14 147 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 TCEAL7Q9BRU2 100 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 CYTL1Q9NRR1 136 aa12.64□□□□□ -0.39
COL9A3-206ENST00000466532 SEC11BP0C7V7 166 aa12.63□□□□□ -0.39
COL9A3-206ENST00000466532 AKR1C3P42330 323 aa12.63□□□□□ -0.39
COL9A3-206ENST00000466532 FHITP49789 147 aa12.63□□□□□ -0.39
COL9A3-206ENST00000466532 Q6ZSA8 131 aa12.63□□□□□ -0.39
COL9A3-206ENST00000466532 DNAJC30Q96LL9 226 aa12.63□□□□□ -0.39
COL9A3-206ENST00000466532 KLK12Q9UKR0 248 aa12.63□□□□□ -0.39
COL9A3-206ENST00000466532 IGKV2D-24A0A075B6R9 120 aa12.62□□□□□ -0.39
COL9A3-206ENST00000466532 A0A087WX48 190 aa12.61□□□□□ -0.39
COL9A3-206ENST00000466532 TRBV10-1A0A0K0K1A3 114 aa12.61□□□□□ -0.39
COL9A3-206ENST00000466532 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
COL9A3-206ENST00000466532 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
COL9A3-206ENST00000466532 PLA2G1BP04054 148 aaKnown RBP12.6□□□□□ -0.39
COL9A3-206ENST00000466532 LINC01620Q4KN68 170 aa12.6□□□□□ -0.39
COL9A3-206ENST00000466532 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
COL9A3-206ENST00000466532 UBE2WQ96B02 151 aa12.6□□□□□ -0.39
COL9A3-206ENST00000466532 TRBV7-3A0A075B6L6 115 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 RBFOX3A6NFN3 312 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 PAGE4O60829 102 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 UBE2D3P61077 147 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 UBE2D2P62837 147 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 ELOBQ15370 118 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 Q8N976 141 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 CHCHD7Q9BUK0 85 aa12.59□□□□□ -0.39
COL9A3-206ENST00000466532 SMLR1H3BR10 107 aa12.57□□□□□ -0.4
COL9A3-206ENST00000466532 RPL19P84098 196 aaKnown RBP12.57□□□□□ -0.4
COL9A3-206ENST00000466532 ZNF56Q15929 161 aa12.57□□□□□ -0.4
COL9A3-206ENST00000466532 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
COL9A3-206ENST00000466532 A0A1B0GV50 99 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 J3QL48 77 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 S100A9P06702 114 aaKnown RBP12.56□□□□□ -0.4
COL9A3-206ENST00000466532 RAB4BP61018 213 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 OR10G8Q8NGN5 311 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 FAM213BQ8TBF2 198 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 SFT2D1Q8WV19 159 aa12.56□□□□□ -0.4
COL9A3-206ENST00000466532 SCO2A0A1W2PP80 73 aa12.55□□□□□ -0.4
COL9A3-206ENST00000466532 TMEM262E9PQX1 116 aa12.55□□□□□ -0.4
COL9A3-206ENST00000466532 ATRAIDQ6UW56 229 aa12.55□□□□□ -0.4
COL9A3-206ENST00000466532 SCXQ7RTU7 201 aa12.55□□□□□ -0.4
COL9A3-206ENST00000466532 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
COL9A3-206ENST00000466532 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
COL9A3-206ENST00000466532 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
COL9A3-206ENST00000466532 PFDN1O60925 122 aa12.54□□□□□ -0.4
COL9A3-206ENST00000466532 CXCL1P09341 107 aa12.54□□□□□ -0.4
COL9A3-206ENST00000466532 Q0VG73 95 aa12.54□□□□□ -0.4
COL9A3-206ENST00000466532 ZNF345Q14585 488 aa12.54□□□□□ -0.4
COL9A3-206ENST00000466532 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
COL9A3-206ENST00000466532 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
COL9A3-206ENST00000466532 UMAD1C9J7I0 102 aa12.53□□□□□ -0.4
COL9A3-206ENST00000466532 BAGE2Q86Y30 109 aa12.53□□□□□ -0.4
COL9A3-206ENST00000466532 MLST8Q9BVC4 326 aa12.53□□□□□ -0.4
COL9A3-206ENST00000466532 C1orf43Q9BWL3 253 aa12.53□□□□□ -0.4
COL9A3-206ENST00000466532 MUC21A0A0G2JKD1 596 aa12.52□□□□□ -0.41
COL9A3-206ENST00000466532 MUC21A0A140T8X8 626 aa12.52□□□□□ -0.41
COL9A3-206ENST00000466532 SNAI2O43623 268 aa12.52□□□□□ -0.41
COL9A3-206ENST00000466532 CRPP02741 224 aa12.52□□□□□ -0.41
COL9A3-206ENST00000466532 SPANXN1Q5VSR9 72 aa12.52□□□□□ -0.41
COL9A3-206ENST00000466532 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
COL9A3-206ENST00000466532 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
COL9A3-206ENST00000466532 ENHOQ6UWT2 76 aa12.51□□□□□ -0.41
COL9A3-206ENST00000466532 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
COL9A3-206ENST00000466532 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.51□□□□□ -0.41
COL9A3-206ENST00000466532 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
COL9A3-206ENST00000466532 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
COL9A3-206ENST00000466532 F5H697 171 aa12.5□□□□□ -0.41
COL9A3-206ENST00000466532 OR5AL1P0C617 328 aa12.5□□□□□ -0.41
COL9A3-206ENST00000466532 SSTP61278 116 aa12.5□□□□□ -0.41
COL9A3-206ENST00000466532 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms