RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 F5H697 171 aa14.43□□□□□ -0.1
LIMS2-212ENST00000466410 LGALS1P09382 135 aaKnown RBP14.43□□□□□ -0.1
LIMS2-212ENST00000466410 G3V4G9 280 aa14.42□□□□□ -0.1
LIMS2-212ENST00000466410 ZFP2Q6ZN57 461 aa14.42□□□□□ -0.1
LIMS2-212ENST00000466410 RPL39P62891 51 aaKnown RBP14.42□□□□□ -0.1
LIMS2-212ENST00000466410 ZNF580Q9UK33 172 aa14.42□□□□□ -0.1
LIMS2-212ENST00000466410 RPL32P62910 135 aaKnown RBP14.41□□□□□ -0.1
LIMS2-212ENST00000466410 SAMD13Q5VXD3 122 aa14.41□□□□□ -0.1
LIMS2-212ENST00000466410 BBC3Q96PG8 261 aaPredicted RBP14.41□□□□□ -0.1
LIMS2-212ENST00000466410 MDFICQ9P1T7 246 aa14.41□□□□□ -0.1
LIMS2-212ENST00000466410 IGIPA6NJ69 53 aa14.41□□□□□ -0.1
LIMS2-212ENST00000466410 EMP1P54849 157 aa14.41□□□□□ -0.1
LIMS2-212ENST00000466410 ZNF479Q96JC4 524 aa14.41□□□□□ -0.1
LIMS2-212ENST00000466410 FAM208BQ5VWN6 2430 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 LINC01619G3V211 115 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 FAM74A4Q5TZK3 123 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 LRRK2Q5S007 2527 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 IGHV3-16A0A0C4DH30 117 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 A0A0J9YX75 114 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 SDHAF1A6NFY7 115 aa14.4□□□□□ -0.1
LIMS2-212ENST00000466410 IGLV4-69A0A075B6H9 119 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 C11orf86A6NJI1 115 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 VCYO14598 125 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 RIPPLY3P57055 190 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 CD300EQ496F6 205 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-212ENST00000466410 ZNF815PA8K554 130 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 GATA3P23771 443 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 FOXI2Q6ZQN5 318 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 C9orf85Q96MD7 179 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 KIR2DL4Q99706 377 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 FBN2P35556 2912 aa14.39□□□□□ -0.11
LIMS2-212ENST00000466410 KLHL30-AS1Q8NEE0 82 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 POLQO75417 2590 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 CREBBPQ92793 2442 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 K7EQG2 157 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 COX6B1P14854 86 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 SYNJ2BPP57105 145 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 SCGB2A2Q13296 93 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 Q8N1Y9 231 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 PLEKHB2Q96CS7 222 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 EPG5Q9HCE0 2579 aa14.38□□□□□ -0.11
LIMS2-212ENST00000466410 LGALS9O00182 355 aa14.37□□□□□ -0.11
LIMS2-212ENST00000466410 SNRPD3P62318 126 aaKnown RBP14.37□□□□□ -0.11
LIMS2-212ENST00000466410 MAPK1IP1LQ8NDC0 245 aa14.37□□□□□ -0.11
LIMS2-212ENST00000466410 ODF3Q96PU9 254 aa14.37□□□□□ -0.11
LIMS2-212ENST00000466410 A0A1B0GWB2 263 aa14.37□□□□□ -0.11
LIMS2-212ENST00000466410 SPINK13Q1W4C9 94 aa14.37□□□□□ -0.11
LIMS2-212ENST00000466410 ANKRD17O75179 2603 aaKnown RBP14.37□□□□□ -0.11
LIMS2-212ENST00000466410 RPL24P83731 157 aaKnown RBP14.36□□□□□ -0.11
LIMS2-212ENST00000466410 PMVKQ15126 192 aa14.36□□□□□ -0.11
LIMS2-212ENST00000466410 DUX5Q96PT3 197 aa14.36□□□□□ -0.11
LIMS2-212ENST00000466410 TRBV27A0A0K0K1C4 114 aa14.36□□□□□ -0.11
LIMS2-212ENST00000466410 RRN3P1Q2M238 152 aa14.36□□□□□ -0.11
LIMS2-212ENST00000466410 MORN3Q6PF18 240 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-212ENST00000466410 LINC01356Q8N9X3 169 aa14.36□□□□□ -0.11
LIMS2-212ENST00000466410 ZNF256Q9Y2P7 627 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-212ENST00000466410 SCGB1D4Q6XE38 83 aa14.35□□□□□ -0.11
LIMS2-212ENST00000466410 UBR5O95071 2799 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-212ENST00000466410 TEX48A0A1B0GUV7 120 aa14.35□□□□□ -0.11
LIMS2-212ENST00000466410 AMTNQ6UX39 209 aa14.35□□□□□ -0.11
LIMS2-212ENST00000466410 TRBV6-5A0A0K0K1A5 114 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 H3BMG7 143 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 DSCR9P59020 149 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 COTL1Q14019 142 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 ZNF56Q15929 161 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 TMEM89A2RUT3 159 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 M0QY20 66 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 TMEM141Q96I45 108 aa14.34□□□□□ -0.11
LIMS2-212ENST00000466410 IGHV1OR15-1A0A075B7D0 117 aa14.33□□□□□ -0.11
LIMS2-212ENST00000466410 TGFAP01135 160 aa14.33□□□□□ -0.11
LIMS2-212ENST00000466410 WFDC2Q14508 124 aa14.33□□□□□ -0.11
LIMS2-212ENST00000466410 TIMM17AQ99595 171 aa14.33□□□□□ -0.11
LIMS2-212ENST00000466410 MXRA5Q9NR99 2828 aa14.33□□□□□ -0.12
LIMS2-212ENST00000466410 LINC01549A6NIU2 74 aa14.33□□□□□ -0.12
LIMS2-212ENST00000466410 SYT8Q8NBV8 401 aa14.33□□□□□ -0.12
LIMS2-212ENST00000466410 A0A096LNT2 108 aa14.32□□□□□ -0.12
LIMS2-212ENST00000466410 HOXA3O43365 443 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-212ENST00000466410 PAPPA-AS1Q5QFB9 102 aa14.32□□□□□ -0.12
LIMS2-212ENST00000466410 ZNRF2Q8NHG8 242 aa14.32□□□□□ -0.12
LIMS2-212ENST00000466410 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
LIMS2-212ENST00000466410 OPRPNQ99935 248 aaPredicted RBP14.31□□□□□ -0.12
LIMS2-212ENST00000466410 HOXD3P31249 432 aaPredicted RBP14.3□□□□□ -0.12
LIMS2-212ENST00000466410 TSPEAR-AS2P59090 65 aa14.3□□□□□ -0.12
LIMS2-212ENST00000466410 HERVK_113P61574 105 aa14.3□□□□□ -0.12
LIMS2-212ENST00000466410 TMEM170BQ5T4T1 132 aa14.3□□□□□ -0.12
LIMS2-212ENST00000466410 F8W1H4 67 aa14.3□□□□□ -0.12
LIMS2-212ENST00000466410 ZNF876PQ49A33 203 aa14.3□□□□□ -0.12
LIMS2-212ENST00000466410 MTURNQ8N3F0 131 aa14.29□□□□□ -0.12
LIMS2-212ENST00000466410 PGPEP1Q9NXJ5 209 aa14.29□□□□□ -0.12
LIMS2-212ENST00000466410 VPREB3Q9UKI3 123 aa14.29□□□□□ -0.12
LIMS2-212ENST00000466410 A0A0J9YY99 117 aa14.29□□□□□ -0.12
LIMS2-212ENST00000466410 P0DMU3 169 aa14.28□□□□□ -0.12
LIMS2-212ENST00000466410 FAM231AP0DMU4 169 aa14.28□□□□□ -0.12
LIMS2-212ENST00000466410 FAM231CP0DMU5 169 aa14.28□□□□□ -0.12
LIMS2-212ENST00000466410 TRPT1Q86TN4 253 aaKnown RBP14.28□□□□□ -0.12
LIMS2-212ENST00000466410 ZNF702PQ9H963 129 aa14.28□□□□□ -0.12
LIMS2-212ENST00000466410 SPANXB1Q9NS25 103 aaPredicted RBP14.28□□□□□ -0.12
LIMS2-212ENST00000466410 J3QLI3 93 aa14.28□□□□□ -0.12
LIMS2-212ENST00000466410 ELANEP08246 267 aa14.27□□□□□ -0.13
LIMS2-212ENST00000466410 RBMY1A1P0DJD3 496 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms