RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 MIEN1Q9BRT3 115 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 A0A087WWL8 130 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 hDV102S1A0JD36 115 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 C20orf202A1L168 122 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 IGLL1P15814 213 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
UBE4B-206ENST00000466379 LINC01546A6NGU7 62 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 PROK1P58294 105 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 SPAG8Q99932 426 aaPredicted RBP9.98□□□□□ -0.81
UBE4B-206ENST00000466379 SETXQ7Z333 2677 aaKnown RBP9.98□□□□□ -0.81
UBE4B-206ENST00000466379 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 KRTAP10-3P60369 221 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 ODF3L2Q3SX64 289 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
UBE4B-206ENST00000466379 CBY3A6NI87 242 aa9.97□□□□□ -0.81
UBE4B-206ENST00000466379 EREGO14944 169 aa9.97□□□□□ -0.81
UBE4B-206ENST00000466379 NDUFA7O95182 113 aa9.97□□□□□ -0.81
UBE4B-206ENST00000466379 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
UBE4B-206ENST00000466379 LINC00315P59091 139 aa9.97□□□□□ -0.81
UBE4B-206ENST00000466379 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
UBE4B-206ENST00000466379 A8MTW9 85 aa9.96□□□□□ -0.81
UBE4B-206ENST00000466379 SMIM17P0DL12 118 aa9.96□□□□□ -0.81
UBE4B-206ENST00000466379 FCER1GP30273 86 aa9.96□□□□□ -0.81
UBE4B-206ENST00000466379 TP73-AS1Q9UF72 201 aa9.96□□□□□ -0.81
UBE4B-206ENST00000466379 SAP30O75446 220 aa9.96□□□□□ -0.82
UBE4B-206ENST00000466379 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
UBE4B-206ENST00000466379 IFI27L1Q96BM0 104 aa9.96□□□□□ -0.82
UBE4B-206ENST00000466379 JMJD8Q96S16 334 aa9.95□□□□□ -0.82
UBE4B-206ENST00000466379 SMIM2Q9BVW6 85 aa9.95□□□□□ -0.82
UBE4B-206ENST00000466379 NIPBLQ6KC79 2804 aaeCLIP9.95□□□□□ -0.82
UBE4B-206ENST00000466379 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
UBE4B-206ENST00000466379 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
UBE4B-206ENST00000466379 DEFB104AQ8WTQ1 72 aa9.95□□□□□ -0.82
UBE4B-206ENST00000466379 TRAV25A0A0B4J276 109 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 F5H697 171 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 LAGE3Q14657 143 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 SNHG12Q9BXW3 62 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 UQCR10Q9UDW1 63 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 TRGV11A0A075B6L2 103 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 DEFB125Q8N687 156 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 POM121L12Q8N7R1 296 aa9.94□□□□□ -0.82
UBE4B-206ENST00000466379 Q6ZN92 141 aa9.93□□□□□ -0.82
UBE4B-206ENST00000466379 SYT8Q8NBV8 401 aa9.93□□□□□ -0.82
UBE4B-206ENST00000466379 ZNF876PQ49A33 203 aa9.93□□□□□ -0.82
UBE4B-206ENST00000466379 OR11H12B2RN74 326 aa9.92□□□□□ -0.82
UBE4B-206ENST00000466379 NUDT3O95989 172 aa9.92□□□□□ -0.82
UBE4B-206ENST00000466379 TCTAP57738 103 aa9.92□□□□□ -0.82
UBE4B-206ENST00000466379 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
UBE4B-206ENST00000466379 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
UBE4B-206ENST00000466379 GOLT1BQ9Y3E0 138 aa9.92□□□□□ -0.82
UBE4B-206ENST00000466379 CRYGDP07320 174 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 ZNF56Q15929 161 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 LGALS9BQ3B8N2 356 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 STHQ8IWL8 128 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 LINC01587Q99440 93 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 CSTL1Q9H114 145 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 WFDC10AQ9H1F0 79 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 DKK2Q9UBU2 259 aa9.91□□□□□ -0.82
UBE4B-206ENST00000466379 M0R143 59 aa9.9□□□□□ -0.82
UBE4B-206ENST00000466379 HNRNPA3P51991 378 aaKnown RBP9.9□□□□□ -0.82
UBE4B-206ENST00000466379 FN1P02751 2386 aaKnown RBP9.9□□□□□ -0.82
UBE4B-206ENST00000466379 INSP01308 110 aa9.9□□□□□ -0.83
UBE4B-206ENST00000466379 PRSS1P07477 247 aa9.9□□□□□ -0.83
UBE4B-206ENST00000466379 ST20Q9HBF5 79 aa9.9□□□□□ -0.83
UBE4B-206ENST00000466379 NSD1Q96L73 2696 aaPredicted RBP9.9□□□□□ -0.83
UBE4B-206ENST00000466379 HIVEP1P15822 2718 aa9.9□□□□□ -0.83
UBE4B-206ENST00000466379 IGHV3OR16-12A0A075B7B8 117 aa9.89□□□□□ -0.83
UBE4B-206ENST00000466379 IGHV3-73A0A0B4J1V6 119 aa9.89□□□□□ -0.83
UBE4B-206ENST00000466379 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
UBE4B-206ENST00000466379 BATFQ16520 125 aa9.89□□□□□ -0.83
UBE4B-206ENST00000466379 TRPT1Q86TN4 253 aaKnown RBP9.89□□□□□ -0.83
UBE4B-206ENST00000466379 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-206ENST00000466379 STPG4Q8N801 248 aa9.89□□□□□ -0.83
UBE4B-206ENST00000466379 A0A1B0GV90 55 aa9.88□□□□□ -0.83
UBE4B-206ENST00000466379 NDUFA11Q86Y39 141 aa9.88□□□□□ -0.83
UBE4B-206ENST00000466379 PPP1R17O96001 155 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 ORMDL2Q53FV1 153 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 C2orf88Q9BSF0 95 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 M0QY20 66 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 AZU1P20160 251 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 TMEM208Q9BTX3 173 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 C2CD3Q4AC94 2353 aa9.87□□□□□ -0.83
UBE4B-206ENST00000466379 ATP5LO75964 103 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
UBE4B-206ENST00000466379 C1orf158Q8N1D5 194 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 C11orf72Q8NBR9 251 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 JMJD1CQ15652 2540 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 SDHAF1A6NFY7 115 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 M0R2P5 195 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 C2orf66Q6UXQ4 117 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 TOMM6Q96B49 74 aa9.86□□□□□ -0.83
UBE4B-206ENST00000466379 MRPL16Q9NX20 251 aaKnown RBP9.86□□□□□ -0.83
UBE4B-206ENST00000466379 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
UBE4B-206ENST00000466379 SPATA3Q8NHX4 192 aa9.85□□□□□ -0.83
UBE4B-206ENST00000466379 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 364.6 ms