RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 H7C1H1 209 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 SLC25A16P16260 332 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 BBC3Q96PG8 261 aaPredicted RBP12.22□□□□□ -0.45
SLX4-202ENST00000466154 SMIM13P0DJ93 91 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 HOXD3P31249 432 aaPredicted RBP12.22□□□□□ -0.45
SLX4-202ENST00000466154 C11orf44Q8N8P7 122 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 TP53TG1Q9Y2A0 90 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 NF1P21359 2839 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 CD300EQ496F6 205 aaPredicted RBP12.22□□□□□ -0.45
SLX4-202ENST00000466154 SUMO4Q6EEV6 95 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 F8VRH5 84 aa12.21□□□□□ -0.45
SLX4-202ENST00000466154 KNCNA6PVL3 124 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 OR11H12B2RN74 326 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 SIVA1O15304 175 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 SLURP1P55000 103 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 Q8N1Y9 231 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 OR11H1Q8NG94 326 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 OR11H2Q8NH07 326 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.46
SLX4-202ENST00000466154 PRSS29PA6NIE9 313 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 GATA3P23771 443 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 PLNP26678 52 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 FAM19A4Q96LR4 140 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 GTF2H5Q6ZYL4 71 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 BAALCQ8WXS3 180 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 KLLNB2CW77 178 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 DSCR9P59020 149 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 CYSLTR1Q9Y271 337 aa12.2□□□□□ -0.46
SLX4-202ENST00000466154 K7EMT4 169 aa12.19□□□□□ -0.46
SLX4-202ENST00000466154 VPREB3Q9UKI3 123 aa12.19□□□□□ -0.46
SLX4-202ENST00000466154 NACAE9PAV3 2078 aa12.19□□□□□ -0.46
SLX4-202ENST00000466154 SCGB1D4Q6XE38 83 aa12.19□□□□□ -0.46
SLX4-202ENST00000466154 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 SAMD5Q5TGI4 173 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 KIR2DL4Q99706 377 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 CHD6Q8TD26 2715 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 HLA-DRB4P13762 266 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 HLA-DRB4X5D2U9 266 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 A0A0J9YX75 114 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 FABP2P12104 132 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
SLX4-202ENST00000466154 RPL24P83731 157 aaKnown RBP12.17□□□□□ -0.46
SLX4-202ENST00000466154 SMAGPQ0VAQ4 97 aa12.17□□□□□ -0.46
SLX4-202ENST00000466154 ZNF876PQ49A33 203 aa12.17□□□□□ -0.46
SLX4-202ENST00000466154 DEFB131AP59861 70 aa12.17□□□□□ -0.46
SLX4-202ENST00000466154 OPRPNQ99935 248 aaPredicted RBP12.17□□□□□ -0.46
SLX4-202ENST00000466154 GTSF1LQ9H1H1 148 aa12.17□□□□□ -0.46
SLX4-202ENST00000466154 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 CEND1Q8N111 149 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 ACANP16112 2415 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 TMEM170BQ5T4T1 132 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 PRADC1Q9BSG0 188 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 LGALS1P09382 135 aaKnown RBP12.16□□□□□ -0.46
SLX4-202ENST00000466154 MTURNQ8N3F0 131 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 Q96MF0 132 aa12.16□□□□□ -0.46
SLX4-202ENST00000466154 MTORP42345 2549 aa12.15□□□□□ -0.46
SLX4-202ENST00000466154 ZNF815PA8K554 130 aa12.15□□□□□ -0.46
SLX4-202ENST00000466154 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.46
SLX4-202ENST00000466154 K7EQG2 157 aa12.15□□□□□ -0.46
SLX4-202ENST00000466154 BRI3O95415 125 aa12.15□□□□□ -0.46
SLX4-202ENST00000466154 ZNF469Q96JG9 3925 aaPredicted RBP12.15□□□□□ -0.47
SLX4-202ENST00000466154 IGHV3-64A0A075B6Q5 118 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 IGHV1OR15-1A0A075B7D0 117 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 A0A1W2PRX2 142 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 IGHV4-31P0DP07 118 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 LINC00315P59091 139 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 ZNF702PQ9H963 129 aa12.15□□□□□ -0.47
SLX4-202ENST00000466154 K7EP34 96 aa12.14□□□□□ -0.47
SLX4-202ENST00000466154 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
SLX4-202ENST00000466154 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLX4-202ENST00000466154 SYT8Q8NBV8 401 aa12.14□□□□□ -0.47
SLX4-202ENST00000466154 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 APRG1Q8IVJ8 170 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 VCYO14598 125 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 PPP1R17O96001 155 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 P0DMU3 169 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 MED14OSP0DP75 135 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 HIST2H2BCQ6DN03 193 aa12.13□□□□□ -0.47
SLX4-202ENST00000466154 TRAV12-1A0A0B4J245 112 aa12.12□□□□□ -0.47
SLX4-202ENST00000466154 C11orf86A6NJI1 115 aa12.12□□□□□ -0.47
SLX4-202ENST00000466154 HIGD1BQ9P298 99 aa12.12□□□□□ -0.47
SLX4-202ENST00000466154 PROK1P58294 105 aa12.12□□□□□ -0.47
SLX4-202ENST00000466154 Q6YL49 198 aa12.12□□□□□ -0.47
SLX4-202ENST00000466154 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 A0A096LNT2 108 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 AMTNQ6UX39 209 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 APCP25054 2843 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 PLEKHB2Q96CS7 222 aa12.11□□□□□ -0.47
SLX4-202ENST00000466154 NIPBLQ6KC79 2804 aaeCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms