RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 PHYHIPLQ96FC7 376 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 VGLL1Q99990 258 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 NDFIP1Q9BT67 221 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 PSMG3Q9BT73 122 aaPredicted RBP4.43□□□□□ -1.7
TPM3-214ENST00000466010 ACTR3CQ9C0K3 210 aaPredicted RBP4.43□□□□□ -1.7
TPM3-214ENST00000466010 MED28Q9H204 178 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 TP53TG3Q9ULZ0 132 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 KLF12Q9Y4X4 402 aa4.43□□□□□ -1.7
TPM3-214ENST00000466010 C2orf66Q6UXQ4 117 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 Q6ZTI0 123 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 SH2D6Q7Z4S9 175 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 OR10G4Q8NGN3 311 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 OR10G9Q8NGN4 311 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 OR2G3Q8NGZ4 309 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 KCNS1Q96KK3 526 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 AQP10Q96PS8 301 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 SMIM3Q9BZL3 60 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 PRO0255Q9UI72 69 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 MRPS16Q9Y3D3 137 aaKnown RBP4.42□□□□□ -1.7
TPM3-214ENST00000466010 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 ICOSQ9Y6W8 199 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
TPM3-214ENST00000466010 TRAV9-2A0A087WT02 112 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 BORCS7-ASMTA0A0B4J1R7 106 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 TRAV21A0A0B4J279 112 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 A0A0J9YY99 117 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 ORM1P02763 201 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 GIPP09681 153 aaPredicted RBP4.41□□□□□ -1.7
TPM3-214ENST00000466010 CDC34P49427 236 aaPredicted RBP4.41□□□□□ -1.7
TPM3-214ENST00000466010 C5orf17Q8NAS9 161 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 Q8TAT8 98 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 RASL10AQ92737 203 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 HYLS1Q96M11 299 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 HIST1H4GQ99525 98 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 NKX6-2Q9C056 277 aaPredicted RBP4.41□□□□□ -1.7
TPM3-214ENST00000466010 TMEM167BQ9NRX6 74 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 TNFSF18Q9UNG2 199 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 HHLA3Q9XRX5 114 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 ALG5Q9Y673 324 aa4.41□□□□□ -1.7
TPM3-214ENST00000466010 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.7
TPM3-214ENST00000466010 PGPA6NDG6 321 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 C9JCJ5 164 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 CXorf1O96002 111 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 PRB4P10163 310 aaPredicted RBP4.4□□□□□ -1.71
TPM3-214ENST00000466010 SAPCD1Q5SSQ6 148 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 NEGR1Q7Z3B1 354 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 TXNDC17Q9BRA2 123 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 SH3BGRL3Q9H299 93 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 TREM1Q9NP99 234 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 SCRT2Q9NQ03 307 aa4.4□□□□□ -1.71
TPM3-214ENST00000466010 A0A096LPF7 62 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 TRAV4A0A0B4J268 109 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 TRGV4A0A0C4DH28 118 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 A0A1W2PRE2 83 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 M0R2P5 195 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 TAAR5O14804 337 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 SIVA1O15304 175 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 ARL14EPLP0DKL9 152 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 PMCHP20382 165 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 SRIP30626 198 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 CRYBA4P53673 196 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 RAB2AP61019 212 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 TMEM183BQ1AE95 376 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 ESRGQ1W209 222 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 PRR9Q5T870 116 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 GOLT1AQ6ZVE7 132 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 TMEM183AQ8IXX5 376 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 SUN5Q8TC36 379 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 TCEAL7Q9BRU2 100 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 DHRS4-AS1Q9P1J3 65 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 NACAE9PAV3 2078 aa4.39□□□□□ -1.71
TPM3-214ENST00000466010 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 C16orf90A8MZG2 172 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 EPM2AB3EWF7 344 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 TCRAP04437 139 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 PFN1P07737 140 aaKnown RBP4.38□□□□□ -1.71
TPM3-214ENST00000466010 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 CFC1P0CG37 223 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 ATP6V0CP27449 155 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 GCHFRP30047 84 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 VAMP3Q15836 100 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 RGS21Q2M5E4 152 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 C10orf126Q8N4M7 172 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 CYB561D1Q8N8Q1 229 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 TMEM75Q8N9X5 138 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 WFDC1Q9HC57 220 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 MRPL16Q9NX20 251 aaKnown RBP4.38□□□□□ -1.71
TPM3-214ENST00000466010 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 NAGKQ9UJ70 344 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 MUC4Q99102 2169 aa4.38□□□□□ -1.71
TPM3-214ENST00000466010 DNAH10Q8IVF4 4471 aa4.37□□□□□ -1.71
TPM3-214ENST00000466010 FXYD6-FXYD2A0A087WZ82 144 aa4.37□□□□□ -1.71
TPM3-214ENST00000466010 CTXND1A0A1B0GTU2 59 aa4.37□□□□□ -1.71
TPM3-214ENST00000466010 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
TPM3-214ENST00000466010 EVI2AP22794 236 aa4.37□□□□□ -1.71
TPM3-214ENST00000466010 FLI1Q01543 452 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms