RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 RHODO00212 210 aa13.79□□□□□ -0.2
CSPG5-204ENST00000465441 LECT2O14960 151 aa13.79□□□□□ -0.2
CSPG5-204ENST00000465441 C1QBP02746 253 aa13.79□□□□□ -0.2
CSPG5-204ENST00000465441 TOR2AQ5JU69 321 aa13.79□□□□□ -0.2
CSPG5-204ENST00000465441 FAM74A4Q5TZK3 123 aa13.79□□□□□ -0.2
CSPG5-204ENST00000465441 SFRP2Q96HF1 295 aa13.79□□□□□ -0.2
CSPG5-204ENST00000465441 A0A087WWL8 130 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 MAP1LC3B2A6NCE7 125 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 ZNF674Q2M3X9 581 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 FAM162BQ5T6X4 162 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 FMC1Q96HJ9 113 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 MAP1LC3BQ9GZQ8 125 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 PHLDA3Q9Y5J5 127 aa13.78□□□□□ -0.2
CSPG5-204ENST00000465441 TMSB15BA0A087X1C1 80 aa13.77□□□□□ -0.21
CSPG5-204ENST00000465441 HMSDA8MTL9 139 aa13.77□□□□□ -0.21
CSPG5-204ENST00000465441 UBE2G1P62253 170 aa13.77□□□□□ -0.21
CSPG5-204ENST00000465441 BAALCQ8WXS3 180 aa13.77□□□□□ -0.21
CSPG5-204ENST00000465441 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.76□□□□□ -0.21
CSPG5-204ENST00000465441 TRBV6-1A0A0K0K1D8 114 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 M0R381 172 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 TPT1P13693 172 aaKnown RBP13.76□□□□□ -0.21
CSPG5-204ENST00000465441 LINC01559Q495D7 138 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 CST9LP1Q5W188 147 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 NIT1Q86X76 327 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 KCNRGQ8N5I3 272 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 DNAJC30Q96LL9 226 aa13.76□□□□□ -0.21
CSPG5-204ENST00000465441 LTAP01374 205 aa13.75□□□□□ -0.21
CSPG5-204ENST00000465441 FHITP49789 147 aa13.75□□□□□ -0.21
CSPG5-204ENST00000465441 COX11Q9Y6N1 276 aa13.75□□□□□ -0.21
CSPG5-204ENST00000465441 URGCP-MRPS24S4R325 110 aa13.75□□□□□ -0.21
CSPG5-204ENST00000465441 Q6ZSA8 131 aa13.74□□□□□ -0.21
CSPG5-204ENST00000465441 STOML3Q8TAV4 291 aa13.74□□□□□ -0.21
CSPG5-204ENST00000465441 KLK12Q9UKR0 248 aa13.74□□□□□ -0.21
CSPG5-204ENST00000465441 FLG2Q5D862 2391 aaPredicted RBP13.74□□□□□ -0.21
CSPG5-204ENST00000465441 MYCBP2O75592 4640 aa13.74□□□□□ -0.21
CSPG5-204ENST00000465441 ZFP82Q8N141 532 aa13.73□□□□□ -0.21
CSPG5-204ENST00000465441 IGKV2D-24A0A075B6R9 120 aa13.72□□□□□ -0.21
CSPG5-204ENST00000465441 PAGE4O60829 102 aa13.72□□□□□ -0.21
CSPG5-204ENST00000465441 AKR1C3P42330 323 aa13.72□□□□□ -0.21
CSPG5-204ENST00000465441 RMI2Q96E14 147 aa13.72□□□□□ -0.21
CSPG5-204ENST00000465441 TCEAL7Q9BRU2 100 aa13.72□□□□□ -0.21
CSPG5-204ENST00000465441 A0A0D9SG52 128 aa13.71□□□□□ -0.21
CSPG5-204ENST00000465441 TRBV10-1A0A0K0K1A3 114 aa13.71□□□□□ -0.21
CSPG5-204ENST00000465441 SEC11BP0C7V7 166 aa13.71□□□□□ -0.21
CSPG5-204ENST00000465441 RPL36AP83881 106 aaKnown RBP13.71□□□□□ -0.21
CSPG5-204ENST00000465441 LINC01620Q4KN68 170 aa13.71□□□□□ -0.21
CSPG5-204ENST00000465441 RPL36ALQ969Q0 106 aaKnown RBP13.71□□□□□ -0.21
CSPG5-204ENST00000465441 SRRM2Q9UQ35 2752 aaKnown RBP13.7□□□□□ -0.22
CSPG5-204ENST00000465441 TRBV7-3A0A075B6L6 115 aa13.7□□□□□ -0.22
CSPG5-204ENST00000465441 BCL2L11O43521 198 aa13.7□□□□□ -0.22
CSPG5-204ENST00000465441 UBE2D3P61077 147 aa13.7□□□□□ -0.22
CSPG5-204ENST00000465441 UBE2D2P62837 147 aa13.7□□□□□ -0.22
CSPG5-204ENST00000465441 Q8N976 141 aa13.7□□□□□ -0.22
CSPG5-204ENST00000465441 UBE2WQ96B02 151 aa13.7□□□□□ -0.22
CSPG5-204ENST00000465441 A0A087WX48 190 aa13.69□□□□□ -0.22
CSPG5-204ENST00000465441 RBFOX3A6NFN3 312 aa13.69□□□□□ -0.22
CSPG5-204ENST00000465441 ELOBQ15370 118 aa13.69□□□□□ -0.22
CSPG5-204ENST00000465441 MBD3L1Q8WWY6 194 aa13.69□□□□□ -0.22
CSPG5-204ENST00000465441 CHCHD7Q9BUK0 85 aa13.69□□□□□ -0.22
CSPG5-204ENST00000465441 DMBT1Q9UGM3 2413 aaPredicted RBP13.69□□□□□ -0.22
CSPG5-204ENST00000465441 KANTRA0A1W2PQU2 76 aa13.68□□□□□ -0.22
CSPG5-204ENST00000465441 RPL19P84098 196 aaKnown RBP13.68□□□□□ -0.22
CSPG5-204ENST00000465441 Q6ZNX1 250 aa13.68□□□□□ -0.22
CSPG5-204ENST00000465441 SFT2D1Q8WV19 159 aa13.68□□□□□ -0.22
CSPG5-204ENST00000465441 TMEM262E9PQX1 116 aa13.67□□□□□ -0.22
CSPG5-204ENST00000465441 PLA2G1BP04054 148 aaKnown RBP13.67□□□□□ -0.22
CSPG5-204ENST00000465441 S100A9P06702 114 aaKnown RBP13.67□□□□□ -0.22
CSPG5-204ENST00000465441 RAB4BP61018 213 aa13.67□□□□□ -0.22
CSPG5-204ENST00000465441 KCNIP4Q6PIL6 250 aa13.67□□□□□ -0.22
CSPG5-204ENST00000465441 TCTE3Q8IZS6 198 aa13.67□□□□□ -0.22
CSPG5-204ENST00000465441 LINC00528Q8N1L1 170 aa13.67□□□□□ -0.22
CSPG5-204ENST00000465441 OR10G8Q8NGN5 311 aa13.67□□□□□ -0.22
CSPG5-204ENST00000465441 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
CSPG5-204ENST00000465441 MLST8Q9BVC4 326 aa13.66□□□□□ -0.22
CSPG5-204ENST00000465441 ZNF471Q9BX82 626 aaPredicted RBP13.66□□□□□ -0.22
CSPG5-204ENST00000465441 A0A1B0GV50 99 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 SCO2A0A1W2PP80 73 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 UMAD1C9J7I0 102 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 BAGE2Q86Y30 109 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 NEXN-AS1Q8NBZ9 246 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 OR10AG1Q8NH19 301 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 FAM213BQ8TBF2 198 aa13.65□□□□□ -0.22
CSPG5-204ENST00000465441 TRBV6-8A0A0A6YYG3 113 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 J3QL48 77 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 CXCL1P09341 107 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 EIF5AP63241 154 aaKnown RBP13.64□□□□□ -0.23
CSPG5-204ENST00000465441 Q0VG73 95 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 TMUB2Q71RG4 321 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 SCXQ7RTU7 201 aa13.64□□□□□ -0.23
CSPG5-204ENST00000465441 SSBP4Q9BWG4 385 aaPredicted RBP13.64□□□□□ -0.23
CSPG5-204ENST00000465441 MUC21A0A0G2JKD1 596 aa13.63□□□□□ -0.23
CSPG5-204ENST00000465441 MUC21A0A140T8X8 626 aa13.63□□□□□ -0.23
CSPG5-204ENST00000465441 SNAI2O43623 268 aa13.63□□□□□ -0.23
CSPG5-204ENST00000465441 ZNF56Q15929 161 aa13.63□□□□□ -0.23
CSPG5-204ENST00000465441 ENHOQ6UWT2 76 aa13.63□□□□□ -0.23
CSPG5-204ENST00000465441 PFDN1O60925 122 aa13.62□□□□□ -0.23
CSPG5-204ENST00000465441 SSTP61278 116 aa13.61□□□□□ -0.23
CSPG5-204ENST00000465441 SPANXN1Q5VSR9 72 aa13.61□□□□□ -0.23
CSPG5-204ENST00000465441 OR5AL1P0C617 328 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms