RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 CEND1Q8N111 149 aa8.66□□□□□ -1.02
CCDC115-204ENST00000465315 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
CCDC115-204ENST00000465315 SIVA1O15304 175 aa8.66□□□□□ -1.02
CCDC115-204ENST00000465315 DUSP14O95147 198 aaKnown RBP8.66□□□□□ -1.02
CCDC115-204ENST00000465315 ZFAND2AQ8N6M9 145 aa8.66□□□□□ -1.02
CCDC115-204ENST00000465315 USMG5Q96IX5 58 aa8.66□□□□□ -1.02
CCDC115-204ENST00000465315 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
CCDC115-204ENST00000465315 ANKRD17O75179 2603 aaKnown RBP8.65□□□□□ -1.02
CCDC115-204ENST00000465315 RPL39P62891 51 aaKnown RBP8.65□□□□□ -1.02
CCDC115-204ENST00000465315 RASL10AQ92737 203 aa8.65□□□□□ -1.02
CCDC115-204ENST00000465315 AZU1P20160 251 aa8.65□□□□□ -1.02
CCDC115-204ENST00000465315 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
CCDC115-204ENST00000465315 ACANP16112 2415 aa8.65□□□□□ -1.03
CCDC115-204ENST00000465315 HERVK_113P61574 105 aa8.65□□□□□ -1.03
CCDC115-204ENST00000465315 OR5A1Q8NGJ0 315 aa8.65□□□□□ -1.03
CCDC115-204ENST00000465315 CNFNQ9BYD5 112 aa8.65□□□□□ -1.03
CCDC115-204ENST00000465315 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
CCDC115-204ENST00000465315 COX8CQ7Z4L0 72 aa8.64□□□□□ -1.03
CCDC115-204ENST00000465315 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
CCDC115-204ENST00000465315 SRSF2Q01130 221 aaKnown RBP8.63□□□□□ -1.03
CCDC115-204ENST00000465315 HLA-DRB4P13762 266 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 WFDC2Q14508 124 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 C11orf44Q8N8P7 122 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 PIFOQ8TCI5 191 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 HLA-DRB4X5D2U9 266 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 IGHV3OR16-12A0A075B7B8 117 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 KNCNA6PVL3 124 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 ZNF575Q86XF7 245 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
CCDC115-204ENST00000465315 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 UTP20O75691 2785 aaKnown RBP8.62□□□□□ -1.03
CCDC115-204ENST00000465315 HOXA3O43365 443 aaPredicted RBP8.62□□□□□ -1.03
CCDC115-204ENST00000465315 C10orf105Q8TEF2 133 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 CLUHP3Q96NS8 147 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 B4DSR2 109 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 IGHG2P01859 326 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 SIGMAR1Q99720 223 aa8.62□□□□□ -1.03
CCDC115-204ENST00000465315 PRRC2AP48634 2157 aaKnown RBP8.62□□□□□ -1.03
CCDC115-204ENST00000465315 AVPP01185 164 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 BAALCQ8WXS3 180 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
CCDC115-204ENST00000465315 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 IGLV2-18A0A075B6J9 118 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 COX6B1P14854 86 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 LGALS3P17931 250 aaKnown RBP8.61□□□□□ -1.03
CCDC115-204ENST00000465315 DEFB136Q30KP8 78 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 ZNF843Q8N446 348 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 LINC01549A6NIU2 74 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 SUMO4Q6EEV6 95 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 PTH2Q96A98 100 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 U3KQE9 123 aa8.61□□□□□ -1.03
CCDC115-204ENST00000465315 IGLL5B9A064 214 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 CKS1BP61024 79 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 RAX2Q96IS3 184 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 LENEPQ9Y5L5 61 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 PPP1R17O96001 155 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 C20orf78Q9BR46 151 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 TMEM238LA0A1B0GVL6 79 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 A6NJY4 79 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 VCYO14598 125 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
CCDC115-204ENST00000465315 GAGE13Q4V321 117 aa8.6□□□□□ -1.03
CCDC115-204ENST00000465315 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
CCDC115-204ENST00000465315 A6NDX4 124 aa8.59□□□□□ -1.03
CCDC115-204ENST00000465315 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
CCDC115-204ENST00000465315 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 PRM2P04554 102 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 ZANQ9Y493 2812 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 ZFP2Q6ZN57 461 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 Q8N1Y9 231 aa8.58□□□□□ -1.04
CCDC115-204ENST00000465315 ADARB2-AS1A8MUL3 147 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 LGALS1P09382 135 aaKnown RBP8.57□□□□□ -1.04
CCDC115-204ENST00000465315 DEFB131AP59861 70 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 UFSP1Q6NVU6 142 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 A0A1W2PRX2 142 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 HIST2H2BCQ6DN03 193 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 DYNLRB2Q8TF09 96 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 ZMAT4Q9H898 229 aa8.57□□□□□ -1.04
CCDC115-204ENST00000465315 RS1O15537 224 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 PMVKQ15126 192 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 NEXN-AS1Q8NBZ9 246 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 VCX2Q9H322 139 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 SS18L2Q9UHA2 77 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 INSL3P51460 131 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 SPXQ9BT56 116 aa8.56□□□□□ -1.04
CCDC115-204ENST00000465315 IGHV1OR15-1A0A075B7D0 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 240.9 ms