RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 FAM3DQ96BQ1 224 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 PAXXQ9BUH6 204 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 MRPL20Q9BYC9 149 aaKnown RBP3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 ZNF442Q9H7R0 627 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 RETNQ9HD89 108 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 ANAPC10Q9UM13 185 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 SLC25A15Q9Y619 301 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 PKD1P98161 4303 aa3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
CACNA1C-223ENST00000465278 C3orf85A0A1B0GTC6 90 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 ZNF727A8MUV8 499 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 LY6LH3BQJ8 138 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 ZNF737O75373 536 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 SLC25A5P05141 298 aaKnown RBP3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 CECR9P0C854 216 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 VDAC1P21796 283 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 NMUP48645 174 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 RND3P61587 244 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 GNB2P62879 340 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 HERVK_113P63121 156 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 SLC38A11Q08AI6 406 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 ATXN7L3Q14CW9 347 aaPredicted RBP3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 TMEM14EPQ6UXP3 125 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 MDP1Q86V88 176 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 VKORC1L1Q8N0U8 176 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 LSM10Q969L4 123 aaKnown RBP3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 KCNS1Q96KK3 526 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 MANBALQ9NQG1 85 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 KLF12Q9Y4X4 402 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 DOCK11Q5JSL3 2073 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 VPS13DQ5THJ4 4388 aa3.53□□□□□ -1.84
CACNA1C-223ENST00000465278 DNAH6Q9C0G6 4158 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 DSCAML1Q8TD84 2053 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 IGLV8-61A0A075B6I0 122 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 IGKV1-27A0A075B6S5 117 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 TRBV7-7A0A0K0K1E9 115 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 IQCF6A8MYZ5 107 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 J3QQQ9 107 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 K7N7A8 449 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 APOMO95445 188 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 CRISP2P16562 243 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 GALR1P47211 349 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 PSMB3P49720 205 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 RBM11P57052 281 aaKnown RBP3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 EBI3Q14213 229 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 KISS1Q15726 138 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 LCN12Q6JVE5 192 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 ACP7Q6ZNF0 438 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 Q6ZRU5 148 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 TCF23Q7RTU1 214 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 LINC01600Q96MT4 127 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 RTL8AQ9BWD3 113 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 FGF23Q9GZV9 251 aaPredicted RBP3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 CST11Q9H112 138 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 RNASE7Q9H1E1 156 aaKnown RBP3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 CKLFQ9UBR5 152 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 TRAPPC1Q9Y5R8 145 aa3.52□□□□□ -1.85
CACNA1C-223ENST00000465278 IGLV3-9A0A075B6K5 115 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 LOC107984640A0A0U1RRK4 108 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 FAM236DA0A1B0GTK5 79 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 H3BUT2 72 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 M0R1B8 84 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 FCN1O00602 326 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 SSSCA1O60232 199 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 ZNF324O75467 553 aaPredicted RBP3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 ZNF688P0C7X2 276 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 P0C879 139 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 FAM236CP0DP71 79 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 IGLL1P15814 213 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 HLA-DMBP28068 263 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 PPP1CBP62140 327 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 Q56UQ5 140 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 C9orf129Q5T035 196 aaKnown RBP3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 C9orf153Q5TBE3 101 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 LYRM7Q5U5X0 104 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 Q6ZS49 121 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 C10orf126Q8N4M7 172 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 TPRX1Q8N7U7 411 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 CYB561D1Q8N8Q1 229 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 C15orf53Q8NAA6 179 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 OR8B3Q8NGG8 313 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 DPH3Q96FX2 82 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 OR8B2Q96RD0 313 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 RNF126Q9BV68 326 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 C21orf62Q9NYP8 219 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 TAAR3PQ9P1P4 343 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 PRO0461Q9UI25 63 aa3.51□□□□□ -1.85
CACNA1C-223ENST00000465278 KIAA2026Q5HYC2 2103 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 IGHV1-18A0A0C4DH31 117 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 IGKV1-12A0A0C4DH73 117 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 ZNF736B4DX44 427 aaPredicted RBP3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 LYZL6O75951 148 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 OXTP01178 125 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 IGKV1D-12P01611 117 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 COX8AP10176 69 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 PFN2P35080 140 aa3.5□□□□□ -1.85
CACNA1C-223ENST00000465278 KRTDAPP60985 99 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms