RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NDUFA4O00483 81 aa7.02□□□□□ -1.29
HPS4-208ENST00000464362 RPL39P62891 51 aaKnown RBP7.02□□□□□ -1.29
HPS4-208ENST00000464362 UNQ9165/PRO28630Q6UXU0 137 aa7.02□□□□□ -1.29
HPS4-208ENST00000464362 ADORA2A-AS1P86434 159 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 CPAMD8Q8IZJ3 1885 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 GAGE7O76087 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 GAGE12FP0CL80 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 GAGE12GP0CL81 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 GAGE12IP0CL82 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 GAGE4Q13068 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 WFDC2Q14508 124 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 PRIMA1Q86XR5 153 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 IGHV1OR15-1A0A075B7D0 117 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 DEFB130BP0DP73 79 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 DEFB130AP0DP74 79 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 IGF1P05019 195 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 CRIP1P50238 77 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 SPATA12Q7Z6I5 190 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 AJUBAQ96IF1 538 aa7.01□□□□□ -1.29
HPS4-208ENST00000464362 IGHV7-4-1A0A0J9YVY3 117 aa7□□□□□ -1.29
HPS4-208ENST00000464362 LY6G5BQ8NDX9 201 aa7□□□□□ -1.29
HPS4-208ENST00000464362 WI2-2373I1.2A0A1W2PRP0 233 aa7□□□□□ -1.29
HPS4-208ENST00000464362 FGF6P10767 208 aa7□□□□□ -1.29
HPS4-208ENST00000464362 RPL36AP83881 106 aaKnown RBP7□□□□□ -1.29
HPS4-208ENST00000464362 ZNF415Q09FC8 603 aa7□□□□□ -1.29
HPS4-208ENST00000464362 RPL36ALQ969Q0 106 aaKnown RBP7□□□□□ -1.29
HPS4-208ENST00000464362 INS-IGF2F8WCM5 200 aa7□□□□□ -1.29
HPS4-208ENST00000464362 J3QQQ9 107 aa7□□□□□ -1.29
HPS4-208ENST00000464362 NPBQ8NG41 125 aa7□□□□□ -1.29
HPS4-208ENST00000464362 PRO3102Q9H379 93 aa7□□□□□ -1.29
HPS4-208ENST00000464362 IGHV4-30-2A0A087WSY4 118 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 TRAV8-4A0A0B4J246 113 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 TRPT1Q86TN4 253 aaKnown RBP6.99□□□□□ -1.29
HPS4-208ENST00000464362 PAX4O43316 350 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 CTRLP40313 264 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 DEFB112Q30KQ8 113 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 TMEM190Q8WZ59 177 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 ZNRF2Q8NHG8 242 aa6.99□□□□□ -1.29
HPS4-208ENST00000464362 TET2Q6N021 2002 aaPredicted RBP6.99□□□□□ -1.29
HPS4-208ENST00000464362 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.98□□□□□ -1.29
HPS4-208ENST00000464362 LINC00574Q9H8X3 128 aa6.98□□□□□ -1.29
HPS4-208ENST00000464362 SPANXA1Q9NS26 97 aa6.98□□□□□ -1.29
HPS4-208ENST00000464362 ODF1Q14990 250 aa6.98□□□□□ -1.29
HPS4-208ENST00000464362 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
HPS4-208ENST00000464362 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
HPS4-208ENST00000464362 OPRPNQ99935 248 aaPredicted RBP6.98□□□□□ -1.29
HPS4-208ENST00000464362 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
HPS4-208ENST00000464362 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
HPS4-208ENST00000464362 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
HPS4-208ENST00000464362 IGLL5B9A064 214 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 G3V4G9 280 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 COL4A2P08572 1712 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 TRBV20-1A0A075B6N2 111 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 NBL1P41271 181 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 LINC01356Q8N9X3 169 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 COPS9Q8WXC6 57 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 PRO1854Q9UHT4 67 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 IGKV2D-26A0A0A0MRZ7 120 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 F8W1H4 67 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 I3L3M4 83 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 PFN2P35080 140 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 APRG1Q8IVJ8 170 aa6.97□□□□□ -1.29
HPS4-208ENST00000464362 ATXN8Q156A1 80 aa6.96□□□□□ -1.29
HPS4-208ENST00000464362 MORN3Q6PF18 240 aaPredicted RBP6.96□□□□□ -1.29
HPS4-208ENST00000464362 C5orf56Q8N8D9 126 aa6.96□□□□□ -1.29
HPS4-208ENST00000464362 NBEAQ8NFP9 2946 aa6.96□□□□□ -1.29
HPS4-208ENST00000464362 INSP01308 110 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 PRB1P04280 392 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 PTH2Q96A98 100 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 SPAG8Q99932 426 aaPredicted RBP6.96□□□□□ -1.3
HPS4-208ENST00000464362 C20orf78Q9BR46 151 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 SIVA1O15304 175 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 HOXD3P31249 432 aaPredicted RBP6.96□□□□□ -1.3
HPS4-208ENST00000464362 SUMO4Q6EEV6 95 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 CCDC140Q96MF4 163 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 C9orf153Q5TBE3 101 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 HIST2H2BDQ6DRA6 164 aa6.96□□□□□ -1.3
HPS4-208ENST00000464362 EXPH5Q8NEV8 1989 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 A0A096LPF7 62 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 Q6ZQT7 251 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 DAND5Q8N907 189 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 RS1O15537 224 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 MALP21145 153 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 MYCNOSP40205 109 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 SLURP1P55000 103 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 C6orf226Q5I0X4 101 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
HPS4-208ENST00000464362 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 IGLV2-11P01706 119 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 SP5Q6BEB4 398 aaPredicted RBP6.95□□□□□ -1.3
HPS4-208ENST00000464362 ZNF493Q6ZR52 646 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 AGRNO00468 2067 aa6.95□□□□□ -1.3
HPS4-208ENST00000464362 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 IFITM1P13164 125 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 CDSNQ15517 529 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 Q8N1Y9 231 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms