RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 OR4C5Q8NGB2 326 aa16.12■□□□□ 0.17
PDLIM2-216ENST00000464275 A6NDN8 102 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 A8MTW9 85 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 GAS8-AS1O95177 125 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 SPINK13Q1W4C9 94 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 Q6ZVH6 145 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 TRAV12-2A0A075B6T6 113 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 NXPH4O95158 308 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 HLA-DRB4P13762 266 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 DPH3P1Q9H4G8 78 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 HLA-DRB4X5D2U9 266 aa16.11■□□□□ 0.17
PDLIM2-216ENST00000464275 TRAV25A0A0B4J276 109 aa16.1■□□□□ 0.17
PDLIM2-216ENST00000464275 CD7P09564 240 aa16.1■□□□□ 0.17
PDLIM2-216ENST00000464275 ODF1Q14990 250 aa16.1■□□□□ 0.17
PDLIM2-216ENST00000464275 KNCNA6PVL3 124 aa16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 SPRY2O43597 315 aa16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 GATA1P15976 413 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 CD300EQ496F6 205 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 NRACQ8N912 160 aa16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 SPAG8Q99932 426 aaPredicted RBP16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 FXYD7P58549 80 aa16.09■□□□□ 0.17
PDLIM2-216ENST00000464275 K7EMI3 77 aa16.08■□□□□ 0.16
PDLIM2-216ENST00000464275 LAGE3Q14657 143 aa16.08■□□□□ 0.16
PDLIM2-216ENST00000464275 TMEM158Q8WZ71 300 aa16.08■□□□□ 0.16
PDLIM2-216ENST00000464275 AP1S3Q96PC3 154 aa16.08■□□□□ 0.16
PDLIM2-216ENST00000464275 MAP6D1Q9H9H5 199 aa16.08■□□□□ 0.16
PDLIM2-216ENST00000464275 IGHV1OR15-1A0A075B7D0 117 aa16.07■□□□□ 0.16
PDLIM2-216ENST00000464275 H3BMM0 161 aa16.07■□□□□ 0.16
PDLIM2-216ENST00000464275 HIGD1BQ9P298 99 aa16.07■□□□□ 0.16
PDLIM2-216ENST00000464275 DKK2Q9UBU2 259 aa16.07■□□□□ 0.16
PDLIM2-216ENST00000464275 IGHV3-16A0A0C4DH30 117 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 IGKCP01834 107 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 PRSS1P07477 247 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 C14orf178Q8N769 122 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 C18orf15Q96N68 181 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 TRAV26-2A0A0B4J265 109 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 H3BRM9 83 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 DPM2O94777 84 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 C9orf85Q96MD7 179 aa16.06■□□□□ 0.16
PDLIM2-216ENST00000464275 SMIM17P0DL12 118 aa16.05■□□□□ 0.16
PDLIM2-216ENST00000464275 PROK1P58294 105 aa16.05■□□□□ 0.16
PDLIM2-216ENST00000464275 ZNF256Q9Y2P7 627 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-216ENST00000464275 C20orf78Q9BR46 151 aa16.04■□□□□ 0.16
PDLIM2-216ENST00000464275 HIVEP2P31629 2446 aa16.04■□□□□ 0.16
PDLIM2-216ENST00000464275 PPP1R17O96001 155 aa16.04■□□□□ 0.16
PDLIM2-216ENST00000464275 NMUP48645 174 aa16.04■□□□□ 0.16
PDLIM2-216ENST00000464275 HHLA3Q9XRX5 114 aa16.04■□□□□ 0.16
PDLIM2-216ENST00000464275 WNK1Q9H4A3 2382 aa16.03■□□□□ 0.16
PDLIM2-216ENST00000464275 CBY3A6NI87 242 aa16.03■□□□□ 0.16
PDLIM2-216ENST00000464275 Q8N1Y9 231 aa16.03■□□□□ 0.16
PDLIM2-216ENST00000464275 POM121L12Q8N7R1 296 aa16.03■□□□□ 0.16
PDLIM2-216ENST00000464275 MGPP08493 103 aa16.02■□□□□ 0.16
PDLIM2-216ENST00000464275 ORMDL2Q53FV1 153 aa16.02■□□□□ 0.16
PDLIM2-216ENST00000464275 SMIM2Q9BVW6 85 aa16.02■□□□□ 0.16
PDLIM2-216ENST00000464275 TRGV11A0A075B6L2 103 aa16.02■□□□□ 0.15
PDLIM2-216ENST00000464275 RBMY1BA6NDE4 496 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-216ENST00000464275 RBMY1EA6NEQ0 496 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-216ENST00000464275 RBMY1DP0C7P1 496 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-216ENST00000464275 KIF25-AS1Q9Y6Z4 181 aa16.02■□□□□ 0.15
PDLIM2-216ENST00000464275 AMMECR1LQ6DCA0 310 aa16.01■□□□□ 0.15
PDLIM2-216ENST00000464275 SYT8Q8NBV8 401 aa16.01■□□□□ 0.15
PDLIM2-216ENST00000464275 MDFICQ9P1T7 246 aa16.01■□□□□ 0.15
PDLIM2-216ENST00000464275 C9orf118A6NHY6 69 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 TRAV12-1A0A0B4J245 112 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 ADARB2-AS1A8MUL3 147 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 PLNP26678 52 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 RASL10AQ92737 203 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 CLUHP3Q96NS8 147 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 MTORP42345 2549 aa16■□□□□ 0.15
PDLIM2-216ENST00000464275 GTF2H5Q6ZYL4 71 aa15.99■□□□□ 0.15
PDLIM2-216ENST00000464275 PCP2Q8IVA1 136 aa15.99■□□□□ 0.15
PDLIM2-216ENST00000464275 A0A087WX48 190 aa15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 RBMY1A1P0DJD3 496 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 RBMY1CP0DJD4 496 aa15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 RBMY1FQ15415 496 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 CUBNO60494 3623 aa15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 LINC00315P59091 139 aa15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 ODF3L2Q3SX64 289 aa15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 NF1P21359 2839 aa15.98■□□□□ 0.15
PDLIM2-216ENST00000464275 TRAV8-6A0A0B4J262 113 aa15.97■□□□□ 0.15
PDLIM2-216ENST00000464275 INAFM1C9JVW0 142 aa15.97■□□□□ 0.15
PDLIM2-216ENST00000464275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-216ENST00000464275 SUMO2P61956 95 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-216ENST00000464275 NSUN5P1Q3KNT7 163 aa15.97■□□□□ 0.15
PDLIM2-216ENST00000464275 LINC01549A6NIU2 74 aa15.96■□□□□ 0.15
PDLIM2-216ENST00000464275 JPT2Q9H910 190 aa15.96■□□□□ 0.15
PDLIM2-216ENST00000464275 ZC2HC1BQ5TFG8 222 aa15.96■□□□□ 0.15
PDLIM2-216ENST00000464275 RPL39LQ96EH5 51 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-216ENST00000464275 CMC4P56277 68 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-216ENST00000464275 OR11H12B2RN74 326 aa15.95■□□□□ 0.14
PDLIM2-216ENST00000464275 SAP30O75446 220 aa15.95■□□□□ 0.14
PDLIM2-216ENST00000464275 RPL32P62910 135 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-216ENST00000464275 RNASE8Q8TDE3 154 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-216ENST00000464275 TOMM6Q96B49 74 aa15.95■□□□□ 0.14
PDLIM2-216ENST00000464275 GAGE10A6NGK3 116 aa15.94■□□□□ 0.14
PDLIM2-216ENST00000464275 H7C1H1 209 aa15.94■□□□□ 0.14
PDLIM2-216ENST00000464275 NDUFA11Q86Y39 141 aa15.94■□□□□ 0.14
PDLIM2-216ENST00000464275 MRPL35Q9NZE8 188 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-216ENST00000464275 LINC00467Q9BRT7 94 aa15.93■□□□□ 0.14
PDLIM2-216ENST00000464275 A0A087WWL8 130 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms