RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 SFRP2Q96HF1 295 aa13.32□□□□□ -0.28
SHISA4-202ENST00000464117 TM2D2Q9BX73 214 aa13.32□□□□□ -0.28
SHISA4-202ENST00000464117 TPT1P13693 172 aaKnown RBP13.31□□□□□ -0.28
SHISA4-202ENST00000464117 Q8N814 137 aa13.31□□□□□ -0.28
SHISA4-202ENST00000464117 MBD3L1Q8WWY6 194 aa13.31□□□□□ -0.28
SHISA4-202ENST00000464117 HMSDA8MTL9 139 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 PAGE4O60829 102 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
SHISA4-202ENST00000464117 TOR2AQ5JU69 321 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 FAM74A4Q5TZK3 123 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 SFT2D1Q8WV19 159 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 Q9UF83 564 aa13.3□□□□□ -0.28
SHISA4-202ENST00000464117 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
SHISA4-202ENST00000464117 TMSB15BA0A087X1C1 80 aa13.29□□□□□ -0.28
SHISA4-202ENST00000464117 TRAV8-3A0A0A6YYJ7 113 aa13.29□□□□□ -0.28
SHISA4-202ENST00000464117 A0A0D9SG52 128 aa13.29□□□□□ -0.28
SHISA4-202ENST00000464117 FAM213BQ8TBF2 198 aa13.29□□□□□ -0.28
SHISA4-202ENST00000464117 M0R381 172 aa13.28□□□□□ -0.28
SHISA4-202ENST00000464117 FRZBQ92765 325 aa13.28□□□□□ -0.28
SHISA4-202ENST00000464117 VPS13BQ7Z7G8 4022 aa13.28□□□□□ -0.28
SHISA4-202ENST00000464117 A0A087WWL8 130 aa13.27□□□□□ -0.29
SHISA4-202ENST00000464117 KANTRA0A1W2PQU2 76 aa13.27□□□□□ -0.29
SHISA4-202ENST00000464117 PFDN1O60925 122 aa13.27□□□□□ -0.29
SHISA4-202ENST00000464117 Q8N3U1 123 aa13.27□□□□□ -0.29
SHISA4-202ENST00000464117 TMEM70Q9BUB7 260 aa13.27□□□□□ -0.29
SHISA4-202ENST00000464117 ZNF471Q9BX82 626 aaPredicted RBP13.27□□□□□ -0.29
SHISA4-202ENST00000464117 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
SHISA4-202ENST00000464117 BCL2L11O43521 198 aa13.26□□□□□ -0.29
SHISA4-202ENST00000464117 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
SHISA4-202ENST00000464117 Q5VSD8 79 aa13.26□□□□□ -0.29
SHISA4-202ENST00000464117 DAZ4Q86SG3 579 aaKnown RBP13.26□□□□□ -0.29
SHISA4-202ENST00000464117 DAZ3Q9NR90 486 aaKnown RBP13.26□□□□□ -0.29
SHISA4-202ENST00000464117 CXCL1P09341 107 aa13.25□□□□□ -0.29
SHISA4-202ENST00000464117 COX11Q9Y6N1 276 aa13.25□□□□□ -0.29
SHISA4-202ENST00000464117 URGCP-MRPS24S4R325 110 aa13.25□□□□□ -0.29
SHISA4-202ENST00000464117 SCO2A0A1W2PP80 73 aa13.24□□□□□ -0.29
SHISA4-202ENST00000464117 RPL36AP83881 106 aaKnown RBP13.24□□□□□ -0.29
SHISA4-202ENST00000464117 RPL36ALQ969Q0 106 aaKnown RBP13.24□□□□□ -0.29
SHISA4-202ENST00000464117 MLST8Q9BVC4 326 aa13.24□□□□□ -0.29
SHISA4-202ENST00000464117 A0A1B0GV50 99 aa13.23□□□□□ -0.29
SHISA4-202ENST00000464117 H2AFB1P0C5Y9 115 aa13.23□□□□□ -0.29
SHISA4-202ENST00000464117 NIT1Q86X76 327 aa13.23□□□□□ -0.29
SHISA4-202ENST00000464117 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
SHISA4-202ENST00000464117 CHCHD7Q9BUK0 85 aa13.23□□□□□ -0.29
SHISA4-202ENST00000464117 C1QBP02746 253 aa13.22□□□□□ -0.29
SHISA4-202ENST00000464117 INAFM2P0DMQ5 153 aa13.22□□□□□ -0.29
SHISA4-202ENST00000464117 RMI2Q96E14 147 aa13.22□□□□□ -0.29
SHISA4-202ENST00000464117 HERC1Q15751 4861 aa13.21□□□□□ -0.29
SHISA4-202ENST00000464117 TRBV7-3A0A075B6L6 115 aa13.21□□□□□ -0.29
SHISA4-202ENST00000464117 RAB4BP61018 213 aa13.21□□□□□ -0.29
SHISA4-202ENST00000464117 UBE2D3P61077 147 aa13.21□□□□□ -0.29
SHISA4-202ENST00000464117 UBE2D2P62837 147 aa13.21□□□□□ -0.29
SHISA4-202ENST00000464117 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
SHISA4-202ENST00000464117 SRRM2Q9UQ35 2752 aaKnown RBP13.21□□□□□ -0.29
SHISA4-202ENST00000464117 SNAI2O43623 268 aa13.2□□□□□ -0.3
SHISA4-202ENST00000464117 SMR3BP02814 79 aaPredicted RBP13.2□□□□□ -0.3
SHISA4-202ENST00000464117 RPL19P84098 196 aaKnown RBP13.2□□□□□ -0.3
SHISA4-202ENST00000464117 WFDC2Q14508 124 aa13.2□□□□□ -0.3
SHISA4-202ENST00000464117 ELOBQ15370 118 aa13.2□□□□□ -0.3
SHISA4-202ENST00000464117 TMUB2Q71RG4 321 aa13.2□□□□□ -0.3
SHISA4-202ENST00000464117 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
SHISA4-202ENST00000464117 SSBP4Q9BWG4 385 aaPredicted RBP13.2□□□□□ -0.3
SHISA4-202ENST00000464117 A0A087WX48 190 aa13.19□□□□□ -0.3
SHISA4-202ENST00000464117 FAM229AH3BQW9 127 aa13.19□□□□□ -0.3
SHISA4-202ENST00000464117 OR5AL1P0C617 328 aa13.19□□□□□ -0.3
SHISA4-202ENST00000464117 KCNIP4Q6PIL6 250 aa13.19□□□□□ -0.3
SHISA4-202ENST00000464117 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
SHISA4-202ENST00000464117 MANBALQ9NQG1 85 aa13.18□□□□□ -0.3
SHISA4-202ENST00000464117 DMBT1Q9UGM3 2413 aaPredicted RBP13.17□□□□□ -0.3
SHISA4-202ENST00000464117 RPL35P42766 123 aaKnown RBP13.17□□□□□ -0.3
SHISA4-202ENST00000464117 ZNF56Q15929 161 aa13.17□□□□□ -0.3
SHISA4-202ENST00000464117 SPANXN1Q5VSR9 72 aa13.17□□□□□ -0.3
SHISA4-202ENST00000464117 KLK12Q9UKR0 248 aa13.17□□□□□ -0.3
SHISA4-202ENST00000464117 MYCBP2O75592 4640 aa13.17□□□□□ -0.3
SHISA4-202ENST00000464117 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
SHISA4-202ENST00000464117 LECT2O14960 151 aa13.16□□□□□ -0.3
SHISA4-202ENST00000464117 RAB5CP51148 216 aa13.16□□□□□ -0.3
SHISA4-202ENST00000464117 HAMPP81172 84 aa13.16□□□□□ -0.3
SHISA4-202ENST00000464117 NEXN-AS1Q8NBZ9 246 aa13.16□□□□□ -0.3
SHISA4-202ENST00000464117 C11orf52Q96A22 123 aa13.16□□□□□ -0.3
SHISA4-202ENST00000464117 IGKV2D-24A0A075B6R9 120 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 TRBV6-8A0A0A6YYG3 113 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 Q0VG73 95 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 EIF5AL1Q6IS14 154 aaKnown RBP13.15□□□□□ -0.3
SHISA4-202ENST00000464117 Q8N976 141 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.15□□□□□ -0.3
SHISA4-202ENST00000464117 BAALCQ8WXS3 180 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 UBE2WQ96B02 151 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 FAM30AQ9NZY2 134 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 GNG13Q9P2W3 67 aa13.15□□□□□ -0.3
SHISA4-202ENST00000464117 TEX46H3BTG2 121 aa13.14□□□□□ -0.31
SHISA4-202ENST00000464117 CCL20P78556 96 aa13.14□□□□□ -0.31
SHISA4-202ENST00000464117 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
SHISA4-202ENST00000464117 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
SHISA4-202ENST00000464117 Q6ZSA8 131 aa13.13□□□□□ -0.31
SHISA4-202ENST00000464117 DNAJC30Q96LL9 226 aa13.13□□□□□ -0.31
SHISA4-202ENST00000464117 MUC21A0A0G2JKD1 596 aa13.12□□□□□ -0.31
SHISA4-202ENST00000464117 MUC21A0A140T8X8 626 aa13.12□□□□□ -0.31
SHISA4-202ENST00000464117 RBFOX3A6NFN3 312 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms