RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SCO1O75880 301 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 GCGP01275 180 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 AZU1P20160 251 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 S100A7P31151 101 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 RNASE4P34096 147 aaKnown RBP2.54□□□□□ -2
SCFD1-204ENST00000463622 CSN1S1P47710 185 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 PEA15Q15121 130 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 DEFB135Q30KP9 77 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 PRR27Q6MZM9 219 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 EBLN2Q6P2I7 272 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 BAGE2Q86Y30 109 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 STHQ8IWL8 128 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 TMEM183AQ8IXX5 376 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 OR10J6PQ8NGY7 276 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 ISOC2Q96AB3 205 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 FMC1Q96HJ9 113 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 SMIM7Q9BQ49 75 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 RNF24Q9Y225 148 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 PKD1P98161 4303 aa2.54□□□□□ -2
SCFD1-204ENST00000463622 IGHV3OR16-12A0A075B7B8 117 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 MUC21A0A0G2JKD1 596 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 MUC21A0A140T8X8 626 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 C7orf71A4D174 169 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 ZNF705GA8MUZ8 300 aaPredicted RBP2.53□□□□□ -2
SCFD1-204ENST00000463622 C9JCJ5 164 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 F8W036 122 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 DEFB4AO15263 64 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 GNRH2O43555 120 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 MGST1P10620 155 aaKnown RBP2.53□□□□□ -2
SCFD1-204ENST00000463622 GNG4P50150 75 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 TAS2R60P59551 318 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 UBE2G1P62253 170 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 ADIRFQ15847 76 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 TMEM78Q5T7P6 136 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 UQCC3Q6UW78 93 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 COX8CQ7Z4L0 72 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 LINC00477Q96M19 166 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 CARHSP1Q9Y2V2 147 aaKnown RBP2.53□□□□□ -2
SCFD1-204ENST00000463622 PYGO1Q9Y3Y4 419 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
SCFD1-204ENST00000463622 KIR2DL5BA0A0G2JN68 375 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 KIR2DL5BA0A0G2JPC4 375 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 DUSP14O95147 198 aaKnown RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 TYMSP04818 313 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 TAGLN2P37802 199 aaKnown RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 CDKN1BP46527 198 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 KIAA1644Q3SXP7 199 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 RNF212Q495C1 297 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 Q6AWC8 147 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 KIR2DL5AQ8N109 375 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 ARL6IP6Q8N6S5 226 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 KIR2DL5BQ8NHK3 375 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 GTSF1Q8WW33 167 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 ODF3Q96PU9 254 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 TXNDC17Q9BRA2 123 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 TCEAL7Q9BRU2 100 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 SEC11CQ9BY50 192 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 NKX6-2Q9C056 277 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 NAGKQ9UJ70 344 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 V9GYV3 84 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 SERTM2A0A1B0GWG4 89 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 KRBOX1C9JBD0 128 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 NDUFS6O75380 124 aaKnown RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 APOC3P02656 99 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 GPX1P07203 203 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 PFN1P07737 140 aaKnown RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 RNASE3P12724 160 aaKnown RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 HTN1P15515 57 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 LEPP41159 167 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 TCL1AP56279 114 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 TMEM241Q24JQ0 296 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 LGALS9BQ3B8N2 356 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 FAM74A3Q4VXF1 159 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 SMUG1Q53HV7 270 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 SAMD13Q5VXD3 122 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 ZNF705AQ6ZN79 300 aaPredicted RBP2.52□□□□□ -2.01
SCFD1-204ENST00000463622 MAPKAPK5-AS1Q8N8E1 139 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 C11orf72Q8NBR9 251 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 C11orf45Q8TAV5 145 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 SMDT1Q9H4I9 107 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 NAT8Q9UHE5 227 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 CELA1Q9UNI1 258 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 ZFP30Q9Y2G7 519 aa2.52□□□□□ -2.01
SCFD1-204ENST00000463622 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
SCFD1-204ENST00000463622 DMBT1Q9UGM3 2413 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-204ENST00000463622 IGHV3-16A0A0C4DH30 117 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 C7orf77A4D0Y5 90 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 H3BVH4 76 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 K7EQM0 130 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 INSP01308 110 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 IGLC6P0CF74 106 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 APOC4P55056 127 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 FOXA3P55318 350 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-204ENST00000463622 Q6ZR54 194 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 CBLN2Q8IUK8 224 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 POM121L12Q8N7R1 296 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 Q8NAQ8 132 aa2.51□□□□□ -2.01
SCFD1-204ENST00000463622 OR2D3Q8NGH3 330 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms