RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SCGB2A2Q13296 93 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 LAGE3Q14657 143 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 Q6ZN92 141 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 A0A087WWL8 130 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 A0A1B0GV90 55 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 PRM2P04554 102 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 SUMO2P61956 95 aaKnown RBP7.47□□□□□ -1.21
MSH5-211ENST00000463144 LBHQ53QV2 105 aaPredicted RBP7.47□□□□□ -1.21
MSH5-211ENST00000463144 LINC00469Q8N7U9 141 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 SPAG8Q99932 426 aaPredicted RBP7.47□□□□□ -1.21
MSH5-211ENST00000463144 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 ST20Q9HBF5 79 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 SMIM17P0DL12 118 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 PROK1P58294 105 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 ODF3L2Q3SX64 289 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 GOLT1BQ9Y3E0 138 aa7.47□□□□□ -1.21
MSH5-211ENST00000463144 WNK1Q9H4A3 2382 aa7.46□□□□□ -1.21
MSH5-211ENST00000463144 CYSRT1A8MQ03 144 aa7.46□□□□□ -1.22
MSH5-211ENST00000463144 NDUFA7O95182 113 aa7.46□□□□□ -1.22
MSH5-211ENST00000463144 SUMO4Q6EEV6 95 aa7.46□□□□□ -1.22
MSH5-211ENST00000463144 DKK2Q9UBU2 259 aa7.46□□□□□ -1.22
MSH5-211ENST00000463144 TRAV25A0A0B4J276 109 aa7.45□□□□□ -1.22
MSH5-211ENST00000463144 CRYGDP07320 174 aa7.45□□□□□ -1.22
MSH5-211ENST00000463144 HNRNPA3P51991 378 aaKnown RBP7.45□□□□□ -1.22
MSH5-211ENST00000463144 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
MSH5-211ENST00000463144 NIPBLQ6KC79 2804 aaeCLIP7.45□□□□□ -1.22
MSH5-211ENST00000463144 CBY3A6NI87 242 aa7.45□□□□□ -1.22
MSH5-211ENST00000463144 KRTAP10-3P60369 221 aa7.45□□□□□ -1.22
MSH5-211ENST00000463144 SETD2Q9BYW2 2564 aaPredicted RBP7.45□□□□□ -1.22
MSH5-211ENST00000463144 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 HTN1P15515 57 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 SYT8Q8NBV8 401 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 CSTL1Q9H114 145 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 HIVEP2P31629 2446 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 TRGV11A0A075B6L2 103 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 ODF1Q14990 250 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 ZNF876PQ49A33 203 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 FAM74A4Q5TZK3 123 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 STPG4Q8N801 248 aa7.44□□□□□ -1.22
MSH5-211ENST00000463144 MRPS16Q9Y3D3 137 aaKnown RBP7.44□□□□□ -1.22
MSH5-211ENST00000463144 NUDT3O95989 172 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 PRSS1P07477 247 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
MSH5-211ENST00000463144 NSUN5P1Q3KNT7 163 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
MSH5-211ENST00000463144 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 F5H697 171 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 PPP1R17O96001 155 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 BATFQ16520 125 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 ORMDL2Q53FV1 153 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 LURAP1LQ8IV03 231 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 CLUHP3Q96NS8 147 aa7.43□□□□□ -1.22
MSH5-211ENST00000463144 INAFM1C9JVW0 142 aa7.42□□□□□ -1.22
MSH5-211ENST00000463144 M0QY20 66 aa7.42□□□□□ -1.22
MSH5-211ENST00000463144 ATP5LO75964 103 aa7.42□□□□□ -1.22
MSH5-211ENST00000463144 RPL32P62910 135 aaKnown RBP7.42□□□□□ -1.22
MSH5-211ENST00000463144 SLC25A34Q6PIV7 304 aa7.42□□□□□ -1.22
MSH5-211ENST00000463144 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
MSH5-211ENST00000463144 TOMM6Q96B49 74 aa7.42□□□□□ -1.22
MSH5-211ENST00000463144 K7EMI3 77 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 COX8AP10176 69 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 NUTF2P61970 127 aaKnown RBP7.41□□□□□ -1.22
MSH5-211ENST00000463144 JMJD8Q96S16 334 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 HHLA3Q9XRX5 114 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 OR11H12B2RN74 326 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 SAP30O75446 220 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 TCTAP57738 103 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 TRPT1Q86TN4 253 aaKnown RBP7.41□□□□□ -1.22
MSH5-211ENST00000463144 C11orf72Q8NBR9 251 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 LINC01587Q99440 93 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 LINC00467Q9BRT7 94 aa7.41□□□□□ -1.22
MSH5-211ENST00000463144 IGLV1-51P01701 117 aa7.4□□□□□ -1.22
MSH5-211ENST00000463144 FGF6P10767 208 aa7.4□□□□□ -1.22
MSH5-211ENST00000463144 ZNF56Q15929 161 aa7.4□□□□□ -1.22
MSH5-211ENST00000463144 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
MSH5-211ENST00000463144 STHQ8IWL8 128 aa7.4□□□□□ -1.22
MSH5-211ENST00000463144 XCL2Q9UBD3 114 aa7.4□□□□□ -1.22
MSH5-211ENST00000463144 SDHAF1A6NFY7 115 aa7.4□□□□□ -1.23
MSH5-211ENST00000463144 INSP01308 110 aa7.4□□□□□ -1.23
MSH5-211ENST00000463144 HINT1P49773 126 aaPredicted RBP7.4□□□□□ -1.23
MSH5-211ENST00000463144 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.23
MSH5-211ENST00000463144 SCGB3A1Q96QR1 104 aa7.4□□□□□ -1.23
MSH5-211ENST00000463144 NACAE9PAV3 2078 aa7.4□□□□□ -1.23
MSH5-211ENST00000463144 NOTCH2Q04721 2471 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.39□□□□□ -1.23
MSH5-211ENST00000463144 VCYO14598 125 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 IGKCP01834 107 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 AZU1P20160 251 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 UFSP1Q6NVU6 142 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 MRPL35Q9NZE8 188 aaKnown RBP7.39□□□□□ -1.23
MSH5-211ENST00000463144 A0A087WX48 190 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 IGHV3-73A0A0B4J1V6 119 aa7.39□□□□□ -1.23
MSH5-211ENST00000463144 M0R2P5 195 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms