RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 PHLDA1Q8WV24 401 aaPredicted RBP12.61□□□□□ -0.39
ACTB-207ENST00000462494 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
ACTB-207ENST00000462494 IGHV3-16A0A0C4DH30 117 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 K7EQG2 157 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 EMP1P54849 157 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 RPL39P62891 51 aaKnown RBP12.6□□□□□ -0.39
ACTB-207ENST00000462494 Q8N1Y9 231 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 SDHAF1A6NFY7 115 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 VCYO14598 125 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
ACTB-207ENST00000462494 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 ZNF56Q15929 161 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 TAL2Q16559 108 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
ACTB-207ENST00000462494 CENPEQ02224 2701 aa12.59□□□□□ -0.39
ACTB-207ENST00000462494 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
ACTB-207ENST00000462494 ZNF256Q9Y2P7 627 aaPredicted RBP12.59□□□□□ -0.39
ACTB-207ENST00000462494 SORL1Q92673 2214 aa12.59□□□□□ -0.39
ACTB-207ENST00000462494 A0A096LNT2 108 aa12.58□□□□□ -0.39
ACTB-207ENST00000462494 E9PLD3 99 aa12.58□□□□□ -0.39
ACTB-207ENST00000462494 TSHBP01222 138 aa12.58□□□□□ -0.39
ACTB-207ENST00000462494 PRB1P04280 392 aa12.58□□□□□ -0.39
ACTB-207ENST00000462494 CRYGDP07320 174 aa12.58□□□□□ -0.39
ACTB-207ENST00000462494 LGALS1P09382 135 aaKnown RBP12.58□□□□□ -0.39
ACTB-207ENST00000462494 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.39
ACTB-207ENST00000462494 ACACBO00763 2458 aa12.58□□□□□ -0.4
ACTB-207ENST00000462494 J3QLI3 93 aa12.58□□□□□ -0.4
ACTB-207ENST00000462494 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
ACTB-207ENST00000462494 C12orf74Q32Q52 190 aa12.58□□□□□ -0.4
ACTB-207ENST00000462494 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
ACTB-207ENST00000462494 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
ACTB-207ENST00000462494 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
ACTB-207ENST00000462494 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
ACTB-207ENST00000462494 FBN2P35556 2912 aa12.57□□□□□ -0.4
ACTB-207ENST00000462494 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
ACTB-207ENST00000462494 RPL32P62910 135 aaKnown RBP12.57□□□□□ -0.4
ACTB-207ENST00000462494 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
ACTB-207ENST00000462494 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
ACTB-207ENST00000462494 TRBV7-3A0A075B6L6 115 aa12.57□□□□□ -0.4
ACTB-207ENST00000462494 ZNF815PA8K554 130 aa12.57□□□□□ -0.4
ACTB-207ENST00000462494 IGIPA6NJ69 53 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 IGLL5B9A064 214 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 LGALS9O00182 355 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 SCGB1D4Q6XE38 83 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 C11orf86A6NJI1 115 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 COX6B1P14854 86 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 ZNF702PQ9H963 129 aa12.56□□□□□ -0.4
ACTB-207ENST00000462494 HOXA3O43365 443 aaPredicted RBP12.55□□□□□ -0.4
ACTB-207ENST00000462494 ELANEP08246 267 aa12.55□□□□□ -0.4
ACTB-207ENST00000462494 HTN1P15515 57 aa12.55□□□□□ -0.4
ACTB-207ENST00000462494 PMVKQ15126 192 aa12.55□□□□□ -0.4
ACTB-207ENST00000462494 KLHL30-AS1Q8NEE0 82 aa12.55□□□□□ -0.4
ACTB-207ENST00000462494 IGLV4-69A0A075B6H9 119 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 ZNF479Q96JC4 524 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 MXRA5Q9NR99 2828 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 TRBV27A0A0K0K1C4 114 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 TCTEX1D4Q5JR98 221 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 Q6YL49 198 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
ACTB-207ENST00000462494 M0QY20 66 aa12.53□□□□□ -0.4
ACTB-207ENST00000462494 MORN3Q6PF18 240 aaPredicted RBP12.53□□□□□ -0.4
ACTB-207ENST00000462494 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
ACTB-207ENST00000462494 TMEM141Q96I45 108 aa12.53□□□□□ -0.4
ACTB-207ENST00000462494 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
ACTB-207ENST00000462494 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.4
ACTB-207ENST00000462494 CREBBPQ92793 2442 aa12.52□□□□□ -0.4
ACTB-207ENST00000462494 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 LINC01549A6NIU2 74 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 KNCNA6PVL3 124 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 SLURP1P55000 103 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 TMEM170BQ5T4T1 132 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 LINC01619G3V211 115 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 HERVK_113P61574 105 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 SRSF9Q13242 221 aaKnown RBP eCLIP12.52□□□□□ -0.41
ACTB-207ENST00000462494 TIMM17AQ99595 171 aa12.52□□□□□ -0.41
ACTB-207ENST00000462494 RIPPLY3P57055 190 aa12.51□□□□□ -0.41
ACTB-207ENST00000462494 PAPPA-AS1Q5QFB9 102 aa12.51□□□□□ -0.41
ACTB-207ENST00000462494 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
ACTB-207ENST00000462494 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
ACTB-207ENST00000462494 AMTNQ6UX39 209 aa12.5□□□□□ -0.41
ACTB-207ENST00000462494 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
ACTB-207ENST00000462494 ZNF462Q96JM2 2506 aa12.5□□□□□ -0.41
ACTB-207ENST00000462494 LRRK2Q5S007 2527 aa12.5□□□□□ -0.41
ACTB-207ENST00000462494 G3V4G9 280 aa12.5□□□□□ -0.41
ACTB-207ENST00000462494 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 DEFB131AP59861 70 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 RBMY1A1P0DJD3 496 aaKnown RBP12.49□□□□□ -0.41
ACTB-207ENST00000462494 RBMY1CP0DJD4 496 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 RBMY1FQ15415 496 aaKnown RBP12.49□□□□□ -0.41
ACTB-207ENST00000462494 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 DUX3Q96PT4 197 aa12.49□□□□□ -0.41
ACTB-207ENST00000462494 H3BMG7 143 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms