RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ATP11AUNQ6ZP68 121 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 FOXI2Q6ZQN5 318 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 FAM19A2Q8N3H0 131 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 C5orf17Q8NAS9 161 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 ATP6V0E2Q8NHE4 81 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 KLK9Q9UKQ9 250 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 MYH10P35580 1976 aa1.65□□□□□ -2.15
CCT4-203ENST00000461540 ZSWIM8A7E2V4 1837 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 PSME4Q14997 1843 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 H3BRM9 83 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 J3QLW9 94 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 SNAPC5O75971 98 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 COX7CP15954 63 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 CNBPP62633 177 aaKnown RBP1.64□□□□□ -2.15
CCT4-203ENST00000461540 IDO2Q6ZQW0 420 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 C3orf62Q6ZUJ4 267 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 SCN3BQ9NY72 215 aa1.64□□□□□ -2.15
CCT4-203ENST00000461540 SPEF2Q9C093 1822 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 HEATR5AQ86XA9 2040 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 TRAV12-2A0A075B6T6 113 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 TRBV6-5A0A0K0K1A5 114 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 C20orf202A1L168 122 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 CORTO00230 105 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 CCL16O15467 120 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 ZCCHC23Q6ZST2 131 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 Q6ZUT4 128 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 Q8N2B8 174 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 PP6455Q8WZ26 134 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 DPH3Q96FX2 82 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 LINC00052Q96N35 136 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 SNRNP25Q9BV90 132 aaKnown RBP1.63□□□□□ -2.15
CCT4-203ENST00000461540 REG4Q9BYZ8 158 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 TAS2R8Q9NYW2 309 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 TNRC6CQ9HCJ0 1690 aaKnown RBP1.63□□□□□ -2.15
CCT4-203ENST00000461540 CPSF1Q10570 1443 aaKnown RBP1.63□□□□□ -2.15
CCT4-203ENST00000461540 LRRC37AA6NMS7 1700 aa1.63□□□□□ -2.15
CCT4-203ENST00000461540 ARHGAP32A7KAX9 2087 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 TRGV2A0A075B6R0 118 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 A6NN06 94 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 GEMIN2O14893 280 aaKnown RBP1.62□□□□□ -2.15
CCT4-203ENST00000461540 ADCYAP1P18509 176 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 GNG4P50150 75 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 MIC13Q5XKP0 118 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 SLC25A26Q70HW3 274 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 NAA60Q9H7X0 242 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 TMEM106BQ9NUM4 274 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 BLMP54132 1417 aaPredicted RBP1.62□□□□□ -2.15
CCT4-203ENST00000461540 COL4A2P08572 1712 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 DDX60Q8IY21 1712 aaKnown RBP1.62□□□□□ -2.15
CCT4-203ENST00000461540 SHANK1Q9Y566 2161 aa1.62□□□□□ -2.15
CCT4-203ENST00000461540 COL4A1P02462 1669 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 PPIP5K1Q6PFW1 1433 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 LOC100130705A0A1B0GUX0 176 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 A0A1W2PRS3 328 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 HIST1H1DP16402 221 aaKnown RBP1.61□□□□□ -2.15
CCT4-203ENST00000461540 KRTAP26-1Q6PEX3 210 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 KRTAP13-1Q8IUC0 172 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 PLPP5Q8NEB5 264 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 VSTM2AQ8TAG5 236 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 DYNLRB2Q8TF09 96 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 PATE1Q8WXA2 126 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 SEC11CQ9BY50 192 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 PAPPA2Q9BXP8 1791 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 MRC1P22897 1456 aa1.61□□□□□ -2.15
CCT4-203ENST00000461540 ARAP2Q8WZ64 1704 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 CUL9Q8IWT3 2517 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 TRAV2A0A0B4J234 112 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 TRAV17A0A0B4J275 112 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 TRBV6-4A0A1B0GX49 114 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 SNCGO76070 127 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 IGHV3-33P01772 117 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 POLR2JP52435 117 aaKnown RBP1.6□□□□□ -2.15
CCT4-203ENST00000461540 TPPP2P59282 170 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 BTG2P78543 158 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 OR2T2Q6IF00 324 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 UNQ5815/PRO19632Q6UWF5 114 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 PPP3R2Q96LZ3 170 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 SPANXDQ9BXN6 97 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 AGPAT4-IT1Q9H0P7 198 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 CCDC88CQ9P219 2028 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 MGAMO43451 1857 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 TRPM7Q96QT4 1865 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 CDK5RAP2Q96SN8 1893 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 KCPQ6ZWJ8 1503 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 MYH13Q9UKX3 1938 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 OTOGLQ3ZCN5 2332 aa1.6□□□□□ -2.15
CCT4-203ENST00000461540 PTPRBP23467 1997 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 IL5P05113 134 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 SMIM6P0DI80 62 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 PIPP12273 146 aaPredicted RBP1.59□□□□□ -2.15
CCT4-203ENST00000461540 RNASE3P12724 160 aaKnown RBP1.59□□□□□ -2.15
CCT4-203ENST00000461540 IL7P13232 177 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 RBP2P50120 134 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 PPP3R1P63098 170 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 RHOHQ15669 191 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 Q56UQ5 140 aa1.59□□□□□ -2.15
CCT4-203ENST00000461540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.59□□□□□ -2.15
CCT4-203ENST00000461540 GTF2H5Q6ZYL4 71 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms