RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
CPNE6-202ENST00000460657 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
CPNE6-202ENST00000460657 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
CPNE6-202ENST00000460657 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
CPNE6-202ENST00000460657 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
CPNE6-202ENST00000460657 CHCHD5Q9BSY4 110 aa9.17□□□□□ -0.94
CPNE6-202ENST00000460657 RAI1Q7Z5J4 1906 aaPredicted RBP9.17□□□□□ -0.94
CPNE6-202ENST00000460657 Q5PR19 223 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 FGF6P10767 208 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
CPNE6-202ENST00000460657 CNFNQ9BYD5 112 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 CEP295Q9C0D2 2601 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
CPNE6-202ENST00000460657 Q8N1Y9 231 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
CPNE6-202ENST00000460657 IGKV2D-26A0A0A0MRZ7 120 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 LEPROTO15243 131 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 PRIMA1Q86XR5 153 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 ZFAND2AQ8N6M9 145 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 ANAPC13Q9BS18 74 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
CPNE6-202ENST00000460657 LAMA2P24043 3122 aaKnown RBP9.15□□□□□ -0.95
CPNE6-202ENST00000460657 IGHV3-38A0A0C4DH36 116 aa9.15□□□□□ -0.95
CPNE6-202ENST00000460657 TMEM89A2RUT3 159 aa9.15□□□□□ -0.95
CPNE6-202ENST00000460657 TSPAN13O95857 204 aa9.15□□□□□ -0.95
CPNE6-202ENST00000460657 ZFAND6Q6FIF0 208 aa9.15□□□□□ -0.95
CPNE6-202ENST00000460657 CKS1BP61024 79 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 CDSNQ15517 529 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 SH2D6Q7Z4S9 175 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 C1QTNF4Q9BXJ3 329 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 C19orf84I3L1E1 186 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 LAMA3Q16787 3333 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 WFDC2Q14508 124 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 TM2D2Q9BX73 214 aa9.14□□□□□ -0.95
CPNE6-202ENST00000460657 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 JPT2Q9H910 190 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 RBMY1BA6NDE4 496 aaKnown RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 RBMY1EA6NEQ0 496 aaKnown RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 RBMY1DP0C7P1 496 aaKnown RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 AZU1P20160 251 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 A0A0J9YX75 114 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 NCOR2Q9Y618 2525 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 CLPSL1A2RUU4 121 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 CFC1P0CG37 223 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
CPNE6-202ENST00000460657 LINC00158P58513 81 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 NRACQ8N912 160 aa9.13□□□□□ -0.95
CPNE6-202ENST00000460657 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 A0A087WW49 117 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 DEFB136Q30KP8 78 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
CPNE6-202ENST00000460657 C10orf126Q8N4M7 172 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 G3V4G9 280 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 NEXN-AS1Q8NBZ9 246 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
CPNE6-202ENST00000460657 Q96MF0 132 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 SLC25A20O43772 301 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 MDFICQ9P1T7 246 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 GAGE4Q13068 117 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 GAGE5Q13069 117 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 NSUN5P1Q3KNT7 163 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 SPANXA1Q9NS26 97 aa9.12□□□□□ -0.95
CPNE6-202ENST00000460657 SLURP1P55000 103 aa9.11□□□□□ -0.95
CPNE6-202ENST00000460657 RBX1P62877 108 aa9.11□□□□□ -0.95
CPNE6-202ENST00000460657 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
CPNE6-202ENST00000460657 IGHG4P01861 327 aa9.11□□□□□ -0.95
CPNE6-202ENST00000460657 CRPP02741 224 aa9.11□□□□□ -0.95
CPNE6-202ENST00000460657 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
CPNE6-202ENST00000460657 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 A4D1N5 150 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 PIFOQ8TCI5 191 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 NRGNQ92686 78 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 ODF3Q96PU9 254 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 U3KQE9 123 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 H3BMM0 161 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 PRR9Q5T870 116 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
CPNE6-202ENST00000460657 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
CPNE6-202ENST00000460657 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
CPNE6-202ENST00000460657 HERVK_113P63121 156 aa9.09□□□□□ -0.95
CPNE6-202ENST00000460657 C20orf203Q8NBC4 194 aa9.09□□□□□ -0.95
CPNE6-202ENST00000460657 A0A096LNJ9 63 aa9.09□□□□□ -0.95
CPNE6-202ENST00000460657 RNASE1P07998 156 aaKnown RBP9.09□□□□□ -0.95
CPNE6-202ENST00000460657 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms