RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ROPN1LQ96C74 230 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 TEX37Q96LM6 180 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 HSPB9Q9BQS6 159 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 OR2H1Q9GZK4 316 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 OR51I1Q9H343 314 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 XAGE1AQ9HD64 81 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 GLTPQ9NZD2 209 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 DOK5Q9P104 306 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 SS18L2Q9UHA2 77 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 ARL2BPQ9Y2Y0 163 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 UFC1Q9Y3C8 167 aa1.06□□□□□ -2.24
RFC4-211ENST00000460408 TRGV2A0A075B6R0 118 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 TRAV36DV7A0A075B6V5 113 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 A0A087WX48 190 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 A0A096LPI6 279 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 IGKV1D-43A0A0B4J1Z2 117 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 TMEM269A0A1B0GVZ9 245 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 EXOC1LA0A1B0GW35 172 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 A0A1B0GWA3 101 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 H3BT86 120 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 H7C2G1 150 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 GPR31O00270 319 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 CREBL2O60519 120 aaPredicted RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 C1QBP02746 253 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 COX4I1P13073 169 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 ZNF25P17030 456 aaPredicted RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 MYL12AP19105 171 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 RPL35P42766 123 aaKnown RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 EMP1P54849 157 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 CCL18P55774 89 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 RPL37AP61513 92 aaKnown RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 GNG3P63215 75 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 HBA1P69905 142 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 BATFQ16520 125 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 SMIM21Q3B7S5 101 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 LIN52Q52LA3 116 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 C10orf128Q5T292 105 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 OGFRL1Q5TC84 451 aaPredicted RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 TEX36Q5VZQ5 186 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 ZNF705AQ6ZN79 300 aaPredicted RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 ZNF826PQ6ZT77 177 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 KTN1-AS1Q86SY8 53 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 CTAGE3PQ8IX95 158 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 CLECL1Q8IZS7 167 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 OR9Q1Q8NGQ5 310 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 GNPDA2Q8TDQ7 276 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 DIRAS2Q96HU8 199 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 CCDC115Q96NT0 180 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 GAFA1Q96PS6 74 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 ADAT1Q9BUB4 502 aaKnown RBP1.05□□□□□ -2.24
RFC4-211ENST00000460408 TPT1P8Q9HAU6 139 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 TMEM138Q9NPI0 162 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 RASL12Q9NYN1 266 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 KAAG1Q9UBP8 84 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 JPT1Q9UK76 154 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 TIMM9Q9Y5J7 89 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 HILPDAQ9Y5L2 63 aa1.05□□□□□ -2.24
RFC4-211ENST00000460408 TRAV3A0A0B4J244 114 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 CCDC160A6NGH7 325 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 GGT3PA6NGU5 568 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 IQCF6A8MYZ5 107 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 PPP5D1E7EU14 171 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 TSTD3H0UI37 97 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 I3L521 148 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 HMGN4O00479 90 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 LEPROTO15243 131 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 CYB5BO43169 146 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 OR2T1O43869 369 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 SULT1C4O75897 302 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 S100A8P05109 93 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 DBIP07108 87 aaKnown RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 OR10J4P0C629 311 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 CCL3L1P16619 93 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 SPI1P17947 270 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 EIF2B2P49770 351 aaKnown RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 RBP2P50120 134 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 TCL1AP56279 114 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 RAB5BP61020 215 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 COPZ1P61923 177 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 EMX2Q04743 252 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 CDK5R1Q15078 307 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 SURF2Q15527 256 aaPredicted RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 HIST3H3Q16695 136 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 TMEM78Q5T7P6 136 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 HAGHLQ6PII5 290 aaPredicted RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 ZCCHC23Q6ZST2 131 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 MRPL57Q9BQC6 102 aaKnown RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 MRPL32Q9BYC8 188 aaKnown RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 MRPS26Q9BYN8 205 aaKnown RBP1.04□□□□□ -2.24
RFC4-211ENST00000460408 DPY30Q9C005 99 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 CCDC90BQ9GZT6 254 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 CHST6Q9GZX3 395 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 WFDC10AQ9H1F0 79 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 NIT2Q9NQR4 276 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 BIN3Q9NQY0 253 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 IDI2-AS1Q9NZ38 188 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 ANGPT4Q9Y264 503 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 LPAP08519 4548 aa1.04□□□□□ -2.24
RFC4-211ENST00000460408 DNAH8Q96JB1 4490 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 TRAV26-2A0A0B4J265 109 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms