RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 C11orf44Q8N8P7 122 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 PTH2Q96A98 100 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 TMEM243Q9BU79 118 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 A4D1N5 150 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 C11orf86A6NJI1 115 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 GDF5OSQ5U4N7 250 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 EPG5Q9HCE0 2579 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 TRAV26-2A0A0B4J265 109 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 A0A1B0GX51 115 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 RHODO00212 210 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 PATE2Q6UY27 113 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 LAMTOR3Q9UHA4 124 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 A0A0C4DFX4 3053 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 TCL1BO95988 128 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 LINC01587Q99440 93 aa4.82□□□□□ -1.64
VPS13D-202ENST00000460333 IGKV3OR2-268A0A0C4DH90 116 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 ASPHD1Q5U4P2 390 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 FAM110DQ8TAY7 271 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 TLN1Q9Y490 2541 aaKnown RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 A0A0U1RRA0 63 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 RBM3P98179 157 aaKnown RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 Q8N1Y9 231 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 ZNF491Q8N8L2 437 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 MALRD1Q5VYJ5 2156 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 HIVEP3Q5T1R4 2406 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 P0DMU3 169 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 FAM231AP0DMU4 169 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 FAM231CP0DMU5 169 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 CMC4P56277 68 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 LINC00310P59036 64 aa4.81□□□□□ -1.64
VPS13D-202ENST00000460333 RPL36AP83881 106 aaKnown RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 PRB3Q04118 309 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
VPS13D-202ENST00000460333 H3BUX3 64 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 DIAPH2-AS1Q14236 149 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 MUSTN1Q8IVN3 82 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 USMG5Q96IX5 58 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 TIMM17AQ99595 171 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 TRAV41A0A0B4J266 112 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 MED14OSP0DP75 135 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 HERVK_113P63121 156 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 CFAP126Q5VTH2 177 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 ZNF503Q96F45 646 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 MLST8Q9BVC4 326 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 U3KQK5 164 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 ABCA2Q9BZC7 2435 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 H0YGX0 51 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 TMEM219Q86XT9 240 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 CEP295Q9C0D2 2601 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 JMJD1CQ15652 2540 aa4.8□□□□□ -1.64
VPS13D-202ENST00000460333 A0A087WWL8 130 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 NDUFA7O95182 113 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 IGLV2-23P01705 113 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 NPBQ8NG41 125 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 BAALCQ8WXS3 180 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 LINC00527Q9UJ94 153 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 PIEZO2Q9H5I5 2752 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 HOXB4P17483 251 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-202ENST00000460333 BRD3OSQ6XYD6 125 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 H3BQ85 93 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 SAA4P35542 130 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 C1orf229Q6ZS94 237 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-202ENST00000460333 CFHR4Q92496 578 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 JPT2Q9H910 190 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 CENPVL3A0A0U1RRI6 287 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 CDSNQ15517 529 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 LAMA1P25391 3075 aa4.79□□□□□ -1.64
VPS13D-202ENST00000460333 IGHV1-69P01742 117 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 IGHG2P01859 326 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 CHCHD5Q9BSY4 110 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 ZNF292O60281 2723 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 MALP21145 153 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 Q8N7P7 452 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 ZNF625Q96I27 306 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-202ENST00000460333 ORMDL1Q9P0S3 153 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 DSCAMO60469 2012 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 ODF3BA8MYP8 253 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 C19orf84I3L1E1 186 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 LGALS9O00182 355 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 PRB4P10163 310 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-202ENST00000460333 XGP55808 180 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 C10orf105Q8TEF2 133 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 TPSG1Q9NRR2 321 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 TP73-AS1Q9UF72 201 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 EYSQ5T1H1 3165 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 FLNBO75369 2602 aaKnown RBP4.78□□□□□ -1.64
VPS13D-202ENST00000460333 ANKRD11Q6UB99 2663 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-202ENST00000460333 GATA1P15976 413 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-202ENST00000460333 SIRPDQ9H106 197 aa4.78□□□□□ -1.64
VPS13D-202ENST00000460333 IGKV1OR2-108A0A075B7D4 117 aa4.77□□□□□ -1.65
VPS13D-202ENST00000460333 ZFP2Q6ZN57 461 aa4.77□□□□□ -1.65
VPS13D-202ENST00000460333 LY6LH3BQJ8 138 aa4.77□□□□□ -1.65
VPS13D-202ENST00000460333 DYNAPQ8N1N2 210 aa4.77□□□□□ -1.65
VPS13D-202ENST00000460333 VSIG2Q96IQ7 327 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms