RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
HERC4-207ENST00000460168 FAM236DA0A1B0GTK5 79 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 FAM236AA0A1B0GUQ0 79 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 FAM236BA0A1B0GV22 79 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 UQCRQO14949 82 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 LY6G6DO95868 133 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 C11orf52Q96A22 123 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 CARD19Q96LW7 228 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 METTL26Q96S19 204 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 ESM1Q9NQ30 184 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 PGPA6NDG6 321 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 KLF5Q13887 457 aaPredicted RBP7.91□□□□□ -1.14
HERC4-207ENST00000460168 TEN1Q86WV5 123 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 Q8N2B8 174 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 IL17DQ8TAD2 202 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 ZNF414Q96IQ9 312 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 Q9H3A6 140 aa7.91□□□□□ -1.14
HERC4-207ENST00000460168 FLNBO75369 2602 aaKnown RBP7.9□□□□□ -1.14
HERC4-207ENST00000460168 IGLL5B9A064 214 aa7.9□□□□□ -1.14
HERC4-207ENST00000460168 ELANEP08246 267 aa7.9□□□□□ -1.14
HERC4-207ENST00000460168 EXOC3-AS1Q8N2X6 119 aa7.9□□□□□ -1.14
HERC4-207ENST00000460168 C9orf85Q96MD7 179 aa7.9□□□□□ -1.14
HERC4-207ENST00000460168 TRBV19A0A075B6N1 114 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 IGHV3OR16-13A0A075B7E8 117 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 IGHV3-74A0A0B4J1X5 117 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 CLPSL1A2RUU4 121 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 NDUFA4O00483 81 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 HLA-DQA1P01909 254 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 AMTNQ6UX39 209 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 Q71RC1 249 aaPredicted RBP7.9□□□□□ -1.15
HERC4-207ENST00000460168 DPH3Q96FX2 82 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 C17orf77Q96MU5 243 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 NF1P21359 2839 aa7.9□□□□□ -1.15
HERC4-207ENST00000460168 TRBV20OR9-2A0A075B6H5 130 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 IGHV3-49A0A0A0MS15 119 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 MRPS12O15235 138 aaKnown RBP7.89□□□□□ -1.15
HERC4-207ENST00000460168 BUB3O43684 328 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 MYCNOSP40205 109 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 LINC01620Q4KN68 170 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 Q6ZSV7 163 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 RETNQ9HD89 108 aa7.89□□□□□ -1.15
HERC4-207ENST00000460168 PEX7O00628 323 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
HERC4-207ENST00000460168 PDE6HQ13956 83 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 UNQ9165/PRO28630Q6UXU0 137 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 OTORQ9NRC9 128 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 EPDR1Q9UM22 224 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 NPIPB6E9PJ23 425 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 CSN1S1P47710 185 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 AAMDCQ9H7C9 122 aa7.88□□□□□ -1.15
HERC4-207ENST00000460168 C9JCJ5 164 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 APOHP02749 345 aaPredicted RBP7.87□□□□□ -1.15
HERC4-207ENST00000460168 RNASE1P07998 156 aaKnown RBP7.87□□□□□ -1.15
HERC4-207ENST00000460168 CENPWQ5EE01 88 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 UBE2E2Q96LR5 201 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 PYGO1Q9Y3Y4 419 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
HERC4-207ENST00000460168 HILS1P60008 231 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 KHDC1LQ5JSQ8 128 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 MYOZ3Q8TDC0 251 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 TMEM190Q8WZ59 177 aa7.87□□□□□ -1.15
HERC4-207ENST00000460168 TCRAP04437 139 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 LGALS1P09382 135 aaKnown RBP7.86□□□□□ -1.15
HERC4-207ENST00000460168 TMEM258P61165 79 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 Q6ZQT7 251 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 DAZ1Q9NQZ3 744 aaKnown RBP7.86□□□□□ -1.15
HERC4-207ENST00000460168 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 J3QQQ9 107 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 OXTP01178 125 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 CRYGAP11844 174 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 SMAD5-AS1Q9Y6J3 95 aa7.86□□□□□ -1.15
HERC4-207ENST00000460168 OR5AL1P0C617 328 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 GAGE2AQ6NT46 116 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 SBSPONQ8IVN8 264 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 NUP35Q8NFH5 326 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 CHCHD5Q9BSY4 110 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 HIGD1BQ9P298 99 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 KLK5Q9Y337 293 aaPredicted RBP7.85□□□□□ -1.15
HERC4-207ENST00000460168 LY96Q9Y6Y9 160 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 U3KQE9 123 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 HIVEP1P15822 2718 aa7.85□□□□□ -1.15
HERC4-207ENST00000460168 M0R3E3 92 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 OVOL1O14753 267 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 MGST1P10620 155 aaKnown RBP7.84□□□□□ -1.15
HERC4-207ENST00000460168 FAM231DQ6ZW35 169 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 GPHB5Q86YW7 130 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 IGF2BP2-AS1Q96M15 143 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 IGHV4OR15-8A0A075B7B6 117 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 A0A087WW49 117 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 PFN2P35080 140 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 MORN3Q6PF18 240 aaPredicted RBP7.84□□□□□ -1.15
HERC4-207ENST00000460168 FMC1Q96HJ9 113 aa7.84□□□□□ -1.15
HERC4-207ENST00000460168 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
HERC4-207ENST00000460168 A8MWL6 223 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms