RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 Q9H8V8 135 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 TRAV26-2A0A0B4J265 109 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 AMTNQ6UX39 209 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 DYNAPQ8N1N2 210 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 NREPQ16612 68 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 BAALCQ8WXS3 180 aa7.03□□□□□ -1.28
SHROOM4-203ENST00000460112 COX7B2Q8TF08 81 aa7.02□□□□□ -1.28
SHROOM4-203ENST00000460112 IGLC7A0M8Q6 106 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 IGLV3-1P01715 115 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 MRPL35Q9NZE8 188 aaKnown RBP7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 CFC1BP0CG36 223 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 CFC1P0CG37 223 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 ZC2HC1AQ96GY0 325 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 TAX1BP3O14907 124 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 Q71RC1 249 aaPredicted RBP7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
SHROOM4-203ENST00000460112 GYPEP15421 78 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 TRAV4A0A0B4J268 109 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 TRBV6-1A0A0K0K1D8 114 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 G3V318 75 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 C14orf132Q9NPU4 83 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 GP9P14770 177 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 H3BT86 120 aa7.01□□□□□ -1.29
SHROOM4-203ENST00000460112 F8W735 103 aaPredicted RBP7□□□□□ -1.29
SHROOM4-203ENST00000460112 Q9HAA7 133 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 A0A0B4J2C4 111 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 MED14OSP0DP75 135 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 LOXP28300 417 aaPredicted RBP7□□□□□ -1.29
SHROOM4-203ENST00000460112 C17orf58Q2M2W7 97 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 PSMB8P28062 276 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 Q6ZQT7 251 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 A0A087WV48 116 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 MUSTN1Q8IVN3 82 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 JMJD1CQ15652 2540 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 SPATA12Q7Z6I5 190 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 C20orf173Q96LM9 149 aa7□□□□□ -1.29
SHROOM4-203ENST00000460112 PRB4P10163 310 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 FXYD5Q96DB9 178 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 C1orf147Q96MC9 270 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 IGF2RP11717 2491 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 HIGD2BQ4VC39 106 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 SPTSSBQ8NFR3 76 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 NTN5Q8WTR8 489 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 PRR15LQ9BU68 103 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 ATP5EP56381 51 aaPredicted RBP6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 FOXI1Q12951 378 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 A0A096LPF7 62 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 UQCRQO14949 82 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 A0A0J9YY99 117 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 TMEM89A2RUT3 159 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 INSL3P51460 131 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 PTH2Q96A98 100 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 SND1-IT1Q9HBX3 110 aa6.99□□□□□ -1.29
SHROOM4-203ENST00000460112 NDUFS7O75251 213 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 ATP5EP2Q5VTU8 51 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 Q6ZSR3 168 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 COL4A6Q14031 1691 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 IGLC1P0CG04 106 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 PIFOQ8TCI5 191 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 HIST2H2BCQ6DN03 193 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 TMEM256-PLSCR3K7ERE1 68 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 DEFB113Q30KQ7 82 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 C4orf3Q8WVX3 66 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 LY6HO94772 140 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 IGLV1-44P01699 117 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 NPBQ8NG41 125 aa6.98□□□□□ -1.29
SHROOM4-203ENST00000460112 Q6ZUT4 128 aa6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 DIRC1Q969H9 104 aa6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 PRR31Q5SQ13 230 aa6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 IGLV3-9A0A075B6K5 115 aa6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 TRBV7-3A0A075B6L6 115 aa6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 IGKV2-29A2NJV5 120 aaPredicted RBP6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 ZNF747Q9BV97 191 aa6.97□□□□□ -1.29
SHROOM4-203ENST00000460112 WT1-ASQ06250 92 aa6.96□□□□□ -1.29
SHROOM4-203ENST00000460112 CASC2Q6XLA1 102 aa6.96□□□□□ -1.29
SHROOM4-203ENST00000460112 Q6ZRM9 215 aa6.96□□□□□ -1.29
SHROOM4-203ENST00000460112 PRR20EP86478 221 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 PRR20CP86479 221 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 PRR20DP86480 221 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 PRR20BP86481 221 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 PRR20AP86496 221 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 C15orf65H3BRN8 121 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 TRBV12-3P01733 135 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 FHL1Q13642 323 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 NDUFC2-KCTD14E9PQ53 114 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 CYYR1Q96J86 154 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 A0A0G2JRQ6 117 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 PRRC2CQ9Y520 2896 aaKnown RBP6.96□□□□□ -1.3
SHROOM4-203ENST00000460112 CRYGBP07316 175 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms