RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 A0A087WWL8 130 aa12.34□□□□□ -0.43
CCDC43-202ENST00000457422 ZC2HC1BQ5TFG8 222 aa12.34□□□□□ -0.43
CCDC43-202ENST00000457422 SUMO4Q6EEV6 95 aa12.34□□□□□ -0.43
CCDC43-202ENST00000457422 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
CCDC43-202ENST00000457422 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 PLNP26678 52 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
CCDC43-202ENST00000457422 HSD52Q0P140 79 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 C2orf66Q6UXQ4 117 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 F8VRH5 84 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 Q6ZSV7 163 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 TMEM160Q9NX00 188 aa12.33□□□□□ -0.44
CCDC43-202ENST00000457422 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 DNAJC9-AS1A6NH13 148 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 LINC01549A6NIU2 74 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 H7C1H1 209 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 NEGR1Q7Z3B1 354 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
CCDC43-202ENST00000457422 TRGV11A0A075B6L2 103 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 DEFB131AP59861 70 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 ZNF124Q15973 351 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 GTSCR1Q86UQ5 136 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 SORL1Q92673 2214 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 ERASQ7Z444 233 aa12.31□□□□□ -0.44
CCDC43-202ENST00000457422 DLX4Q92988 240 aaPredicted RBP12.31□□□□□ -0.44
CCDC43-202ENST00000457422 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
CCDC43-202ENST00000457422 CBY3A6NI87 242 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 CRYGDP07320 174 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 UBE2V1Q13404 147 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 TMEM61Q8N0U2 210 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 F5H697 171 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 H3BMM0 161 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 VCYO14598 125 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 RBMY1A1P0DJD3 496 aaKnown RBP12.3□□□□□ -0.44
CCDC43-202ENST00000457422 RBMY1CP0DJD4 496 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 RBMY1FQ15415 496 aaKnown RBP12.3□□□□□ -0.44
CCDC43-202ENST00000457422 BAALCQ8WXS3 180 aa12.3□□□□□ -0.44
CCDC43-202ENST00000457422 FLNAP21333 2647 aaKnown RBP12.29□□□□□ -0.44
CCDC43-202ENST00000457422 TRBV27A0A0K0K1C4 114 aa12.29□□□□□ -0.44
CCDC43-202ENST00000457422 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
CCDC43-202ENST00000457422 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
CCDC43-202ENST00000457422 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
CCDC43-202ENST00000457422 CHTOPQ9Y3Y2 248 aaKnown RBP12.29□□□□□ -0.44
CCDC43-202ENST00000457422 CCDC168Q8NDH2 2452 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 DYNLRB2Q8TF09 96 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 CHD6Q8TD26 2715 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
CCDC43-202ENST00000457422 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
CCDC43-202ENST00000457422 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 M0QY20 66 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 CCL25O15444 150 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
CCDC43-202ENST00000457422 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 TTTY13Q9BZ97 58 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
CCDC43-202ENST00000457422 A6NDN8 102 aa12.27□□□□□ -0.45
CCDC43-202ENST00000457422 PTTG1IPP53801 180 aa12.27□□□□□ -0.45
CCDC43-202ENST00000457422 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.45
CCDC43-202ENST00000457422 PLA2G2AP14555 144 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 RIPPLY3P57055 190 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 KRTAP1-1Q07627 177 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 ZNF56Q15929 161 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 ZNF876PQ49A33 203 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 MAP6D1Q9H9H5 199 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 MORN3Q6PF18 240 aaPredicted RBP12.26□□□□□ -0.45
CCDC43-202ENST00000457422 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 JMJD8Q96S16 334 aa12.26□□□□□ -0.45
CCDC43-202ENST00000457422 SPAG8Q99932 426 aaPredicted RBP12.26□□□□□ -0.45
CCDC43-202ENST00000457422 TRBV25-1A0A075B6N4 114 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
CCDC43-202ENST00000457422 TP53TG1Q9Y2A0 90 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 PRSS29PA6NIE9 313 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 FHL3Q13643 280 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 VAMP3Q15836 100 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 RAX2Q96IS3 184 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 EDA2RQ9HAV5 297 aa12.25□□□□□ -0.45
CCDC43-202ENST00000457422 ANK3Q12955 4377 aaKnown RBP12.24□□□□□ -0.45
CCDC43-202ENST00000457422 PDZD2O15018 2839 aa12.24□□□□□ -0.45
CCDC43-202ENST00000457422 H3BRM9 83 aa12.24□□□□□ -0.45
CCDC43-202ENST00000457422 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
CCDC43-202ENST00000457422 TMEM141Q96I45 108 aa12.24□□□□□ -0.45
CCDC43-202ENST00000457422 TIMM17AQ99595 171 aa12.24□□□□□ -0.45
CCDC43-202ENST00000457422 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
CCDC43-202ENST00000457422 TSHBP01222 138 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 TRAV25A0A0B4J276 109 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 J3QKU1 62 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 HTN1P15515 57 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 RHOHQ15669 191 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
CCDC43-202ENST00000457422 CD28P10747 220 aa12.22□□□□□ -0.45
CCDC43-202ENST00000457422 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
CCDC43-202ENST00000457422 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms