RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
SF3B4-202ENST00000457312 TAS2R30P59541 319 aa9.38□□□□□ -0.91
SF3B4-202ENST00000457312 GOLT1AQ6ZVE7 132 aa9.38□□□□□ -0.91
SF3B4-202ENST00000457312 NEXN-AS1Q8NBZ9 246 aa9.38□□□□□ -0.91
SF3B4-202ENST00000457312 MBPP02686 304 aaPredicted RBP9.37□□□□□ -0.91
SF3B4-202ENST00000457312 EIF5AP63241 154 aaKnown RBP9.37□□□□□ -0.91
SF3B4-202ENST00000457312 C15orf40Q8WUR7 153 aa9.37□□□□□ -0.91
SF3B4-202ENST00000457312 SMIM4Q8WVI0 70 aa9.37□□□□□ -0.91
SF3B4-202ENST00000457312 HYLS1Q96M11 299 aa9.37□□□□□ -0.91
SF3B4-202ENST00000457312 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
SF3B4-202ENST00000457312 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
SF3B4-202ENST00000457312 MITD1Q8WV92 249 aa9.36□□□□□ -0.91
SF3B4-202ENST00000457312 CARD19Q96LW7 228 aa9.36□□□□□ -0.91
SF3B4-202ENST00000457312 NMES1Q9C002 83 aa9.36□□□□□ -0.91
SF3B4-202ENST00000457312 PHLDA3Q9Y5J5 127 aa9.36□□□□□ -0.91
SF3B4-202ENST00000457312 UBE2L5PA0A1B0GUS4 154 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 SFT2D2O95562 160 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 GCGP01275 180 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
SF3B4-202ENST00000457312 BAXQ07812 192 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 NEDD8Q15843 81 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
SF3B4-202ENST00000457312 UQCC1Q9NVA1 299 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 OR5AC2Q9NZP5 309 aa9.35□□□□□ -0.91
SF3B4-202ENST00000457312 EIF3GO75821 320 aaKnown RBP eCLIP9.34□□□□□ -0.91
SF3B4-202ENST00000457312 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
SF3B4-202ENST00000457312 PPP1R1AQ13522 171 aa9.34□□□□□ -0.91
SF3B4-202ENST00000457312 SFRP2Q96HF1 295 aa9.34□□□□□ -0.91
SF3B4-202ENST00000457312 MCUBQ9NWR8 336 aa9.34□□□□□ -0.91
SF3B4-202ENST00000457312 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
SF3B4-202ENST00000457312 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
SF3B4-202ENST00000457312 IGKV3D-20A0A0C4DH25 116 aa9.33□□□□□ -0.92
SF3B4-202ENST00000457312 MRPS10P82664 201 aaKnown RBP9.33□□□□□ -0.92
SF3B4-202ENST00000457312 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
SF3B4-202ENST00000457312 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
SF3B4-202ENST00000457312 ANKRD20A5PA0PJZ0 165 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 C7orf66A4D0T2 115 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 H3BVH4 76 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 OR7C2O60412 319 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
SF3B4-202ENST00000457312 ZNF674Q2M3X9 581 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 TMEM97Q5BJF2 176 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 LINC00526Q96FQ7 95 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 SGK494Q96LW2 274 aa9.32□□□□□ -0.92
SF3B4-202ENST00000457312 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
SF3B4-202ENST00000457312 LYRM2Q9NU23 88 aaPredicted RBP9.32□□□□□ -0.92
SF3B4-202ENST00000457312 A0A087WZ39 114 aa9.31□□□□□ -0.92
SF3B4-202ENST00000457312 A0A087X002 238 aa9.31□□□□□ -0.92
SF3B4-202ENST00000457312 IQCJQ1A5X6 159 aa9.31□□□□□ -0.92
SF3B4-202ENST00000457312 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.31□□□□□ -0.92
SF3B4-202ENST00000457312 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
SF3B4-202ENST00000457312 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
SF3B4-202ENST00000457312 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
SF3B4-202ENST00000457312 TRBV6-1A0A0K0K1D8 114 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 FGF7P21781 194 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 SPANXN2Q5MJ10 180 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 MZT2AQ6P582 158 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 OR11H4Q8NGC9 324 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
SF3B4-202ENST00000457312 A0A1B0GUV1 79 aa9.29□□□□□ -0.92
SF3B4-202ENST00000457312 CST7O76096 145 aa9.29□□□□□ -0.92
SF3B4-202ENST00000457312 SULT1A2P50226 295 aa9.29□□□□□ -0.92
SF3B4-202ENST00000457312 NCS1P62166 190 aa9.29□□□□□ -0.92
SF3B4-202ENST00000457312 GNG5P63218 68 aa9.29□□□□□ -0.92
SF3B4-202ENST00000457312 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
SF3B4-202ENST00000457312 LOC107984640A0A0U1RRK4 108 aa9.28□□□□□ -0.92
SF3B4-202ENST00000457312 AQP10Q96PS8 301 aa9.28□□□□□ -0.92
SF3B4-202ENST00000457312 NPCDR1Q9BY65 106 aa9.28□□□□□ -0.92
SF3B4-202ENST00000457312 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
SF3B4-202ENST00000457312 CTF1Q16619 201 aa9.27□□□□□ -0.93
SF3B4-202ENST00000457312 TYMSOSQ8TAI1 123 aa9.26□□□□□ -0.93
SF3B4-202ENST00000457312 NAA50Q9GZZ1 169 aaKnown RBP9.26□□□□□ -0.93
SF3B4-202ENST00000457312 ARMS2P0C7Q2 107 aa9.25□□□□□ -0.93
SF3B4-202ENST00000457312 BCL2P10415 239 aa9.25□□□□□ -0.93
SF3B4-202ENST00000457312 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
SF3B4-202ENST00000457312 RAB4BP61018 213 aa9.25□□□□□ -0.93
SF3B4-202ENST00000457312 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
SF3B4-202ENST00000457312 SMUG1Q53HV7 270 aa9.25□□□□□ -0.93
SF3B4-202ENST00000457312 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
SF3B4-202ENST00000457312 M0R381 172 aa9.24□□□□□ -0.93
SF3B4-202ENST00000457312 ZNF56Q15929 161 aa9.24□□□□□ -0.93
SF3B4-202ENST00000457312 ZFP69Q49AA0 526 aa9.24□□□□□ -0.93
SF3B4-202ENST00000457312 IGKV3OR2-268A0A0C4DH90 116 aa9.23□□□□□ -0.93
SF3B4-202ENST00000457312 FGF6P10767 208 aa9.23□□□□□ -0.93
SF3B4-202ENST00000457312 VBP1P61758 197 aa9.23□□□□□ -0.93
SF3B4-202ENST00000457312 IAH1Q2TAA2 248 aaPredicted RBP9.23□□□□□ -0.93
SF3B4-202ENST00000457312 FAM74A1Q5RGS3 127 aa9.23□□□□□ -0.93
SF3B4-202ENST00000457312 AP3S1Q92572 193 aa9.23□□□□□ -0.93
SF3B4-202ENST00000457312 BCAP31P51572 246 aa9.22□□□□□ -0.93
SF3B4-202ENST00000457312 FOXI1Q12951 378 aa9.22□□□□□ -0.93
SF3B4-202ENST00000457312 DNLZQ5SXM8 178 aa9.22□□□□□ -0.93
SF3B4-202ENST00000457312 OR5C1Q8NGR4 320 aa9.22□□□□□ -0.93
SF3B4-202ENST00000457312 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
SF3B4-202ENST00000457312 L7N2F9 121 aa9.21□□□□□ -0.94
SF3B4-202ENST00000457312 VAMP2P63027 116 aa9.21□□□□□ -0.94
SF3B4-202ENST00000457312 MCFD2Q8NI22 146 aa9.21□□□□□ -0.94
SF3B4-202ENST00000457312 PSG8Q9UQ74 426 aa9.21□□□□□ -0.94
SF3B4-202ENST00000457312 B4DEV8 164 aa9.2□□□□□ -0.94
SF3B4-202ENST00000457312 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms