RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LGALS3P17931 250 aaKnown RBP7.75□□□□□ -1.17
CLIP4-208ENST00000456385 TCF15Q12870 199 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 EBI3Q14213 229 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 ZNF876PQ49A33 203 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 PIP4P1Q86T03 277 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 ODF3Q96PU9 254 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 ZNF580Q9UK33 172 aa7.75□□□□□ -1.17
CLIP4-208ENST00000456385 ANKHD1Q8IWZ3 2542 aaKnown RBP7.75□□□□□ -1.17
CLIP4-208ENST00000456385 IGHV1-69DA0A0B4J2H0 117 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 TRBV7-9A0A0J9YWB2 115 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 M0R1W7 72 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 Q1RN00 199 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 U3KQE9 123 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 VPS13CQ709C8 3753 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 GRNP28799 593 aaKnown RBP7.74□□□□□ -1.17
CLIP4-208ENST00000456385 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
CLIP4-208ENST00000456385 FAM159AQ6UWV7 190 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 SMIM20Q8N5G0 67 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 LINC00477Q96M19 166 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 KIF25-AS1Q9Y6Z4 181 aa7.74□□□□□ -1.17
CLIP4-208ENST00000456385 HERV-K104P63124 156 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 PRR30Q53SZ7 412 aaPredicted RBP7.73□□□□□ -1.17
CLIP4-208ENST00000456385 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 C15orf53Q8NAA6 179 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 OR10J6PQ8NGY7 276 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 EEF1AKMT3Q96AZ1 226 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 LENEPQ9Y5L5 61 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 OTOGLQ3ZCN5 2332 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 COL12A1Q99715 3063 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 SPTBN2O15020 2390 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 SDHAF1A6NFY7 115 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 F5H697 171 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 RPL32P62910 135 aaKnown RBP7.73□□□□□ -1.17
CLIP4-208ENST00000456385 UNQ9165/PRO28630Q6UXU0 137 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
CLIP4-208ENST00000456385 ZNF256Q9Y2P7 627 aaPredicted RBP7.73□□□□□ -1.17
CLIP4-208ENST00000456385 TRAV8-4A0A0B4J246 113 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 ADARB2-AS1A8MUL3 147 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 M0QXV9 152 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 PPP1R17O96001 155 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 ZFP36P26651 326 aaKnown RBP7.72□□□□□ -1.17
CLIP4-208ENST00000456385 C9orf139Q6ZV77 190 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 IGHV4OR15-8A0A075B7B6 117 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 A0A087WW49 117 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 VCYO14598 125 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 TRIAP1O43715 76 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 P0DMU3 169 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 FAM231AP0DMU4 169 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 FAM231CP0DMU5 169 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 RPL11P62913 178 aaKnown RBP7.72□□□□□ -1.17
CLIP4-208ENST00000456385 ATXN8Q156A1 80 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 POM121L12Q8N7R1 296 aa7.72□□□□□ -1.17
CLIP4-208ENST00000456385 SPTBN1Q01082 2364 aaKnown RBP7.71□□□□□ -1.17
CLIP4-208ENST00000456385 A0A0B4J2C4 111 aa7.71□□□□□ -1.18
CLIP4-208ENST00000456385 TMEM223A0PJW6 202 aa7.71□□□□□ -1.18
CLIP4-208ENST00000456385 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
CLIP4-208ENST00000456385 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.18
CLIP4-208ENST00000456385 TRBV7-1A0A0A6YYK4 115 aa7.7□□□□□ -1.18
CLIP4-208ENST00000456385 Q8NA96 180 aa7.7□□□□□ -1.18
CLIP4-208ENST00000456385 SOCS3O14543 225 aa7.7□□□□□ -1.18
CLIP4-208ENST00000456385 LEPROTO15243 131 aa7.7□□□□□ -1.18
CLIP4-208ENST00000456385 TMEM95Q3KNT9 176 aa7.7□□□□□ -1.18
CLIP4-208ENST00000456385 Q6ZSV7 163 aa7.7□□□□□ -1.18
CLIP4-208ENST00000456385 TRBV10-2A0A0K0K1G8 114 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 H3BMM0 161 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 MED14OSP0DP75 135 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 RPL13AP40429 203 aaKnown RBP7.69□□□□□ -1.18
CLIP4-208ENST00000456385 MINOS1Q5TGZ0 78 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 C3orf56Q8N813 242 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 UBE2WQ96B02 151 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 FAM19A4Q96LR4 140 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 MINOS1-NBL1R4GNA1 71 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 TLN1Q9Y490 2541 aaKnown RBP7.69□□□□□ -1.18
CLIP4-208ENST00000456385 A0A0J9YXV3 536 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 OOSP1A8MZH6 123 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 OVOL1O14753 267 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 NXPH4O95158 308 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 ZNF22P17026 224 aaPredicted RBP7.69□□□□□ -1.18
CLIP4-208ENST00000456385 KLK9Q2XQG4 91 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 Q6Q795 121 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 FAM110AQ9BQ89 295 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 KLK9Q9UKQ9 250 aa7.69□□□□□ -1.18
CLIP4-208ENST00000456385 A0A0J9YXY3 114 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 TRBV27A0A0K0K1C4 114 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 H7C423 109 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 LGALS9O00182 355 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 PRSS2P07478 247 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 TMEM219Q86XT9 240 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 DEFB123Q8N688 67 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 DUX3Q96PT4 197 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 NBASA2RRP1 2371 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 M0R2P5 195 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 UBE2E1P51965 193 aa7.68□□□□□ -1.18
CLIP4-208ENST00000456385 NPC2P61916 151 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms