RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 FMC1Q96HJ9 113 aa12.27□□□□□ -0.45
UBE2D4-208ENST00000454350 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
UBE2D4-208ENST00000454350 SMLR1H3BR10 107 aa12.26□□□□□ -0.45
UBE2D4-208ENST00000454350 LINC01559Q495D7 138 aa12.26□□□□□ -0.45
UBE2D4-208ENST00000454350 FRZBQ92765 325 aa12.26□□□□□ -0.45
UBE2D4-208ENST00000454350 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
UBE2D4-208ENST00000454350 TCEAL7Q9BRU2 100 aa12.25□□□□□ -0.45
UBE2D4-208ENST00000454350 RHODO00212 210 aa12.24□□□□□ -0.45
UBE2D4-208ENST00000454350 SYT8Q8NBV8 401 aa12.24□□□□□ -0.45
UBE2D4-208ENST00000454350 OR11H4Q8NGC9 324 aa12.24□□□□□ -0.45
UBE2D4-208ENST00000454350 A0A087WWC5 75 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 A0A087WWL8 130 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 UBE2G1P62253 170 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 RGS21Q2M5E4 152 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 CST9LP1Q5W188 147 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 KCNRGQ8N5I3 272 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 TM2D2Q9BX73 214 aa12.23□□□□□ -0.45
UBE2D4-208ENST00000454350 TMSB15BA0A087X1C1 80 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 PAGE4O60829 102 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 FAM74A4Q5TZK3 123 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 NIT1Q86X76 327 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 MBD3L1Q8WWY6 194 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
UBE2D4-208ENST00000454350 M0R381 172 aa12.21□□□□□ -0.45
UBE2D4-208ENST00000454350 C1QBP02746 253 aa12.21□□□□□ -0.45
UBE2D4-208ENST00000454350 ZNF345Q14585 488 aa12.21□□□□□ -0.45
UBE2D4-208ENST00000454350 Q6ZSA8 131 aa12.21□□□□□ -0.45
UBE2D4-208ENST00000454350 STOML3Q8TAV4 291 aa12.21□□□□□ -0.45
UBE2D4-208ENST00000454350 MLST8Q9BVC4 326 aa12.21□□□□□ -0.45
UBE2D4-208ENST00000454350 LECT2O14960 151 aa12.2□□□□□ -0.46
UBE2D4-208ENST00000454350 SEC11BP0C7V7 166 aa12.2□□□□□ -0.46
UBE2D4-208ENST00000454350 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
UBE2D4-208ENST00000454350 AKR1C3P42330 323 aa12.2□□□□□ -0.46
UBE2D4-208ENST00000454350 ZFP82Q8N141 532 aa12.19□□□□□ -0.46
UBE2D4-208ENST00000454350 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
UBE2D4-208ENST00000454350 SCO2A0A1W2PP80 73 aa12.18□□□□□ -0.46
UBE2D4-208ENST00000454350 UBE2D3P61077 147 aa12.18□□□□□ -0.46
UBE2D4-208ENST00000454350 UBE2D2P62837 147 aa12.18□□□□□ -0.46
UBE2D4-208ENST00000454350 RPL19P84098 196 aaKnown RBP12.18□□□□□ -0.46
UBE2D4-208ENST00000454350 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
UBE2D4-208ENST00000454350 HMSDA8MTL9 139 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 FAM229AH3BQW9 127 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 CXCL1P09341 107 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 TOR2AQ5JU69 321 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 FAM213BQ8TBF2 198 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
UBE2D4-208ENST00000454350 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
UBE2D4-208ENST00000454350 UMAD1C9J7I0 102 aa12.16□□□□□ -0.46
UBE2D4-208ENST00000454350 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
UBE2D4-208ENST00000454350 ATRAIDQ6UW56 229 aa12.16□□□□□ -0.46
UBE2D4-208ENST00000454350 SSBP4Q9BWG4 385 aaPredicted RBP12.16□□□□□ -0.46
UBE2D4-208ENST00000454350 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
UBE2D4-208ENST00000454350 A0A1B0GV50 99 aa12.15□□□□□ -0.46
UBE2D4-208ENST00000454350 SNAI2O43623 268 aa12.15□□□□□ -0.46
UBE2D4-208ENST00000454350 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-208ENST00000454350 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 LINC01620Q4KN68 170 aa12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
UBE2D4-208ENST00000454350 A0A0D9SG52 128 aa12.13□□□□□ -0.47
UBE2D4-208ENST00000454350 BCL2L11O43521 198 aa12.13□□□□□ -0.47
UBE2D4-208ENST00000454350 RAB4BP61018 213 aa12.13□□□□□ -0.47
UBE2D4-208ENST00000454350 ZNF471Q9BX82 626 aaPredicted RBP12.13□□□□□ -0.47
UBE2D4-208ENST00000454350 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
UBE2D4-208ENST00000454350 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
UBE2D4-208ENST00000454350 OR5AL1P0C617 328 aa12.12□□□□□ -0.47
UBE2D4-208ENST00000454350 TMUB2Q71RG4 321 aa12.12□□□□□ -0.47
UBE2D4-208ENST00000454350 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
UBE2D4-208ENST00000454350 KIF25-AS1Q9Y6Z4 181 aa12.12□□□□□ -0.47
UBE2D4-208ENST00000454350 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
UBE2D4-208ENST00000454350 MUC21A0A0G2JKD1 596 aa12.11□□□□□ -0.47
UBE2D4-208ENST00000454350 MUC21A0A140T8X8 626 aa12.11□□□□□ -0.47
UBE2D4-208ENST00000454350 H2AFB1P0C5Y9 115 aa12.11□□□□□ -0.47
UBE2D4-208ENST00000454350 CCL20P78556 96 aa12.11□□□□□ -0.47
UBE2D4-208ENST00000454350 RMI2Q96E14 147 aa12.11□□□□□ -0.47
UBE2D4-208ENST00000454350 A0A087WX48 190 aa12.1□□□□□ -0.47
UBE2D4-208ENST00000454350 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
UBE2D4-208ENST00000454350 Q8N976 141 aa12.1□□□□□ -0.47
UBE2D4-208ENST00000454350 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
UBE2D4-208ENST00000454350 KANTRA0A1W2PQU2 76 aa12.09□□□□□ -0.47
UBE2D4-208ENST00000454350 PFDN1O60925 122 aa12.09□□□□□ -0.47
UBE2D4-208ENST00000454350 RPL35P42766 123 aaKnown RBP12.09□□□□□ -0.47
UBE2D4-208ENST00000454350 ZNF56Q15929 161 aa12.09□□□□□ -0.47
UBE2D4-208ENST00000454350 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
UBE2D4-208ENST00000454350 C11orf52Q96A22 123 aa12.09□□□□□ -0.47
UBE2D4-208ENST00000454350 IGLV2-8P01709 118 aa12.08□□□□□ -0.48
UBE2D4-208ENST00000454350 ELOBQ15370 118 aa12.08□□□□□ -0.48
UBE2D4-208ENST00000454350 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
UBE2D4-208ENST00000454350 TRAV1-1A0A0B4J248 108 aa12.07□□□□□ -0.48
UBE2D4-208ENST00000454350 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
UBE2D4-208ENST00000454350 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
UBE2D4-208ENST00000454350 VAX2Q9UIW0 290 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms