RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 KIF25-AS1Q9Y6Z4 181 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
HLA-DPA1-244ENST00000453337 TRGV2A0A075B6R0 118 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 A0A087WWL8 130 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 GAGE12BA1L429 117 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 RHODO00212 210 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 GAGE7O76087 117 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 PPBPP02775 128 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 GAGE12FP0CL80 117 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 GAGE12GP0CL81 117 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 GAGE12IP0CL82 117 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 DEFA6Q01524 100 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 SLAQ13239 276 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 OR4C5Q8NGB2 326 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 B9D2Q9BPU9 175 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 RETNQ9HD89 108 aa8.96□□□□□ -0.98
HLA-DPA1-244ENST00000453337 TRAV4A0A0B4J268 109 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 F5H697 171 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 DEFB4AO15263 64 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 CKS2P33552 79 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 KIAA1644Q3SXP7 199 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 MRPL51Q4U2R6 128 aaKnown RBP8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 FAM222AQ5U5X8 452 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 CFAP126Q5VTH2 177 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 ZFP2Q6ZN57 461 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 POM121L12Q8N7R1 296 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 MRAP2Q96G30 205 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 C18orf15Q96N68 181 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 SAMD10Q9BYL1 202 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
HLA-DPA1-244ENST00000453337 PPP1R17O96001 155 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 MGPP08493 103 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 NHLRC4P0CG21 123 aaPredicted RBP8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 DEFB130BP0DP73 79 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 DEFB130AP0DP74 79 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 LINC00315P59091 139 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 ORMDL3Q8N138 153 aa8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 C11orf68Q9H3H3 251 aaKnown RBP8.94□□□□□ -0.98
HLA-DPA1-244ENST00000453337 PHOX2AO14813 284 aa8.93□□□□□ -0.98
HLA-DPA1-244ENST00000453337 RAB5BP61020 215 aa8.93□□□□□ -0.98
HLA-DPA1-244ENST00000453337 DAD1P61803 113 aa8.93□□□□□ -0.98
HLA-DPA1-244ENST00000453337 ZNF56Q15929 161 aa8.93□□□□□ -0.98
HLA-DPA1-244ENST00000453337 U3KQK5 164 aa8.93□□□□□ -0.98
HLA-DPA1-244ENST00000453337 H7C1H1 209 aa8.92□□□□□ -0.98
HLA-DPA1-244ENST00000453337 UFSP1Q6NVU6 142 aa8.92□□□□□ -0.98
HLA-DPA1-244ENST00000453337 PRELID3AQ96N28 172 aa8.92□□□□□ -0.98
HLA-DPA1-244ENST00000453337 ALKBH7Q9BT30 221 aaPredicted RBP8.92□□□□□ -0.98
HLA-DPA1-244ENST00000453337 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
HLA-DPA1-244ENST00000453337 D6R8Y8 96 aa8.91□□□□□ -0.98
HLA-DPA1-244ENST00000453337 IGHV3-53P01767 116 aa8.91□□□□□ -0.98
HLA-DPA1-244ENST00000453337 SRIP30626 198 aa8.91□□□□□ -0.98
HLA-DPA1-244ENST00000453337 ZNF479Q96JC4 524 aa8.91□□□□□ -0.98
HLA-DPA1-244ENST00000453337 IGHV3-73A0A0B4J1V6 119 aa8.9□□□□□ -0.98
HLA-DPA1-244ENST00000453337 TRGV4A0A0C4DH28 118 aa8.9□□□□□ -0.98
HLA-DPA1-244ENST00000453337 A0A0J9YWU9 116 aa8.9□□□□□ -0.98
HLA-DPA1-244ENST00000453337 SUMO4Q6EEV6 95 aa8.9□□□□□ -0.98
HLA-DPA1-244ENST00000453337 EDA2RQ9HAV5 297 aa8.9□□□□□ -0.98
HLA-DPA1-244ENST00000453337 TRAV26-2A0A0B4J265 109 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 SMKR1H3BMG3 65 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 M0QY20 66 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BKO60814 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 TNFRSF6BO95407 300 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 ATP5G1P05496 136 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BJP06899 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BOP23527 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BBP33778 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BDP58876 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BCP62807 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST2H2BEQ16778 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BHQ93079 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BNQ99877 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HIST1H2BMQ99879 126 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 NIT2Q9NQR4 276 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
HLA-DPA1-244ENST00000453337 TRBV6-4A0A1B0GX49 114 aa8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 NCR2O95944 276 aa8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 Q0VG73 95 aa8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 FHL2Q14192 279 aa8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 OR10J3Q5JRS4 329 aa8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 C11orf45Q8TAV5 145 aa8.88□□□□□ -0.99
HLA-DPA1-244ENST00000453337 TRBV10-1A0A0K0K1A3 114 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 NPYP01303 97 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 C12orf74Q32Q52 190 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 Q6ZSN1 163 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 NRACQ8N912 160 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 C18orf32Q8TCD1 76 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 DNAJC30Q96LL9 226 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 C20orf78Q9BR46 151 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 PRADC1Q9BSG0 188 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 MAP1LC3AQ9H492 121 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 HHLA3Q9XRX5 114 aa8.87□□□□□ -0.99
HLA-DPA1-244ENST00000453337 TRBV6-5A0A0K0K1A5 114 aa8.86□□□□□ -0.99
HLA-DPA1-244ENST00000453337 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms