RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	ZNF471	Q9BX82	626 aa	Predicted RBP	5.86	□□□□□ -1.47
RFX3-209	ENST00000451859	NKX6-2	Q9C056	277 aa	Predicted RBP	5.86	□□□□□ -1.47
RFX3-209	ENST00000451859	PARL	Q9H300	379 aa		5.86	□□□□□ -1.47
RFX3-209	ENST00000451859		A0A087WTM6	91 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	TRBV6-4	A0A1B0GX49	114 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	KANTR	A0A1W2PQU2	76 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859		A8MWV9	139 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	KRBOX1	C9JBD0	128 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	PAGE4	O60829	102 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	ARMS2	P0C7Q2	107 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	MGST1	P10620	155 aa	Known RBP	5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	FAM162B	Q5T6X4	162 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	C10orf126	Q8N4M7	172 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	OR11H4	Q8NGC9	324 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	ATP6V0E2	Q8NHE4	81 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	SFT2D1	Q8WV19	159 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	FMC1	Q96HJ9	113 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859	SAMD10	Q9BYL1	202 aa		5.85	□□□□□ -1.47
RFX3-209	ENST00000451859		M0R381	172 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	BCL2L11	O43521	198 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	CIDEA	O60543	219 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	PFDN1	O60925	122 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	TIRAP	P58753	221 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	ZNF345	Q14585	488 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	LELP1	Q5T871	98 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	C14orf178	Q8N769	122 aa	Predicted RBP	5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	SYT8	Q8NBV8	401 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	PTH2	Q96A98	100 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	GTSF1L	Q9H1H1	148 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	SCRT2	Q9NQ03	307 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	IL36B	Q9NZH7	164 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859		Q9UF83	564 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	ZFP30	Q9Y2G7	519 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859	PHLDA3	Q9Y5J5	127 aa		5.84	□□□□□ -1.47
RFX3-209	ENST00000451859		A0A087WWL8	130 aa		5.83	□□□□□ -1.48
RFX3-209	ENST00000451859		A0A0D9SG52	128 aa		5.83	□□□□□ -1.48
RFX3-209	ENST00000451859	LTA	P01374	205 aa		5.83	□□□□□ -1.48
RFX3-209	ENST00000451859	SEC11B	P0C7V7	166 aa		5.83	□□□□□ -1.48
RFX3-209	ENST00000451859	TPT1	P13693	172 aa	Known RBP	5.83	□□□□□ -1.48
RFX3-209	ENST00000451859	RPL19	P84098	196 aa	Known RBP	5.83	□□□□□ -1.48
RFX3-209	ENST00000451859	LINC01556	Q5JQF7	62 aa		5.83	□□□□□ -1.48
RFX3-209	ENST00000451859	HMSD	A8MTL9	139 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	UMAD1	C9J7I0	102 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859		K7EP13	123 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	KRTAP10-1	P60331	282 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	SST	P61278	116 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	ZNF674	Q2M3X9	581 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	PRR27	Q6MZM9	219 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	ZFP2	Q6ZN57	461 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	TMUB2	Q71RG4	321 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	ZFP82	Q8N141	532 aa		5.82	□□□□□ -1.48
RFX3-209	ENST00000451859	MUC21	A0A0G2JKD1	596 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	TRBV6-1	A0A0K0K1D8	114 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	MUC21	A0A140T8X8	626 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	IBA57-AS1	B1ANH7	110 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	RHOD	O00212	210 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	HAMP	P81172	84 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	UFSP1	Q6NVU6	142 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859		Q8N1X5	172 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	MBD3L1	Q8WWY6	194 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	SFRP2	Q96HF1	295 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	TCEAL7	Q9BRU2	100 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	GNG13	Q9P2W3	67 aa		5.81	□□□□□ -1.48
RFX3-209	ENST00000451859	IGLV5-52	A0A0A0MRZ9	124 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	LECT2	O14960	151 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	LINC00694	P0DN24	101 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	EIF5A	P63241	154 aa	Known RBP	5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	PIK3CD-AS1	Q5SR53	167 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	DNLZ	Q5SXM8	178 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	COX8C	Q7Z4L0	72 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	DAZ4	Q86SG3	579 aa	Known RBP	5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	BAGE2	Q86Y30	109 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	OR10AG1	Q8NH19	301 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	DAZ3	Q9NR90	486 aa	Known RBP	5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	FAT1	Q14517	4588 aa		5.8	□□□□□ -1.48
RFX3-209	ENST00000451859	S100A9	P06702	114 aa	Known RBP	5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	GCSH	P23434	173 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	CCL20	P78556	96 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	ZNF56	Q15929	161 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	DERL1	Q9BUN8	251 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	URGCP-MRPS24	S4R325	110 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	DNAH8	Q96JB1	4490 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859	VPS13B	Q7Z7G8	4022 aa		5.79	□□□□□ -1.48
RFX3-209	ENST00000451859		A0A087WWC5	75 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	LRCOL1	A6NCL2	159 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	EPM2A	B3EWF7	344 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	RPL35	P42766	123 aa	Known RBP	5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	XG	P55808	180 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	RPL36A	P83881	106 aa	Known RBP	5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	WFDC2	Q14508	124 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	LAGE3	Q14657	143 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	SPANXN1	Q5VSR9	72 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859		Q8N814	137 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	RPL36AL	Q969Q0	106 aa	Known RBP	5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	DNAJC30	Q96LL9	226 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	MANBAL	Q9NQG1	85 aa		5.78	□□□□□ -1.48
RFX3-209	ENST00000451859	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	TRAV8-3	A0A0A6YYJ7	113 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859		F5H697	171 aa		5.77	□□□□□ -1.49
RFX3-209	ENST00000451859	SMR3B	P02814	79 aa	Predicted RBP	5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms