RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 FAM162BQ5T6X4 162 aa9.14□□□□□ -0.95
TOM1-211ENST00000449508 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
TOM1-211ENST00000449508 UFSP1Q6NVU6 142 aa9.14□□□□□ -0.95
TOM1-211ENST00000449508 COX8CQ7Z4L0 72 aa9.14□□□□□ -0.95
TOM1-211ENST00000449508 Q8N3U1 123 aa9.14□□□□□ -0.95
TOM1-211ENST00000449508 C14orf178Q8N769 122 aaPredicted RBP9.14□□□□□ -0.95
TOM1-211ENST00000449508 PHLDA3Q9Y5J5 127 aa9.14□□□□□ -0.95
TOM1-211ENST00000449508 A0A087WWC5 75 aa9.13□□□□□ -0.95
TOM1-211ENST00000449508 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
TOM1-211ENST00000449508 RHODO00212 210 aa9.13□□□□□ -0.95
TOM1-211ENST00000449508 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
TOM1-211ENST00000449508 TPT1P13693 172 aaKnown RBP9.13□□□□□ -0.95
TOM1-211ENST00000449508 ZNF674Q2M3X9 581 aa9.13□□□□□ -0.95
TOM1-211ENST00000449508 SRRM2Q9UQ35 2752 aaKnown RBP9.12□□□□□ -0.95
TOM1-211ENST00000449508 A0A087WWL8 130 aa9.12□□□□□ -0.95
TOM1-211ENST00000449508 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
TOM1-211ENST00000449508 M0R381 172 aa9.12□□□□□ -0.95
TOM1-211ENST00000449508 FHITP49789 147 aa9.12□□□□□ -0.95
TOM1-211ENST00000449508 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
TOM1-211ENST00000449508 SFRP2Q96HF1 295 aa9.12□□□□□ -0.95
TOM1-211ENST00000449508 DAZ3Q9NR90 486 aaKnown RBP9.12□□□□□ -0.95
TOM1-211ENST00000449508 TRBV6-1A0A0K0K1D8 114 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 PAGE4O60829 102 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 LTAP01374 205 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 AKR1C3P42330 323 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 HAMPP81172 84 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 TOR2AQ5JU69 321 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 TMEM70Q9BUB7 260 aa9.11□□□□□ -0.95
TOM1-211ENST00000449508 FAM229AH3BQW9 127 aa9.1□□□□□ -0.95
TOM1-211ENST00000449508 BCL2L11O43521 198 aa9.1□□□□□ -0.95
TOM1-211ENST00000449508 NKX2-5P52952 324 aaPredicted RBP9.1□□□□□ -0.95
TOM1-211ENST00000449508 TMUB2Q71RG4 321 aa9.1□□□□□ -0.95
TOM1-211ENST00000449508 SFT2D1Q8WV19 159 aa9.1□□□□□ -0.95
TOM1-211ENST00000449508 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
TOM1-211ENST00000449508 VPS13BQ7Z7G8 4022 aa9.09□□□□□ -0.95
TOM1-211ENST00000449508 LECT2O14960 151 aa9.09□□□□□ -0.95
TOM1-211ENST00000449508 SEC11BP0C7V7 166 aa9.09□□□□□ -0.95
TOM1-211ENST00000449508 WFDC2Q14508 124 aa9.09□□□□□ -0.95
TOM1-211ENST00000449508 ZFP82Q8N141 532 aa9.09□□□□□ -0.95
TOM1-211ENST00000449508 DMBT1Q9UGM3 2413 aaPredicted RBP9.09□□□□□ -0.96
TOM1-211ENST00000449508 A0A1B0GV50 99 aa9.08□□□□□ -0.96
TOM1-211ENST00000449508 S100A9P06702 114 aaKnown RBP9.08□□□□□ -0.96
TOM1-211ENST00000449508 NIT1Q86X76 327 aa9.08□□□□□ -0.96
TOM1-211ENST00000449508 FAM213BQ8TBF2 198 aa9.08□□□□□ -0.96
TOM1-211ENST00000449508 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
TOM1-211ENST00000449508 FAM30AQ9NZY2 134 aa9.08□□□□□ -0.96
TOM1-211ENST00000449508 COX11Q9Y6N1 276 aa9.08□□□□□ -0.96
TOM1-211ENST00000449508 KANTRA0A1W2PQU2 76 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 UMAD1C9J7I0 102 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 RPL36AP83881 106 aaKnown RBP9.07□□□□□ -0.96
TOM1-211ENST00000449508 SLC51BQ86UW2 128 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 BAALCQ8WXS3 180 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 RPL36ALQ969Q0 106 aaKnown RBP9.07□□□□□ -0.96
TOM1-211ENST00000449508 RMI2Q96E14 147 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 ZNF471Q9BX82 626 aaPredicted RBP9.07□□□□□ -0.96
TOM1-211ENST00000449508 KLK12Q9UKR0 248 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 DNAH8Q96JB1 4490 aa9.07□□□□□ -0.96
TOM1-211ENST00000449508 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.06□□□□□ -0.96
TOM1-211ENST00000449508 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
TOM1-211ENST00000449508 A0A087WX48 190 aa9.06□□□□□ -0.96
TOM1-211ENST00000449508 TRBV10-1A0A0K0K1A3 114 aa9.06□□□□□ -0.96
TOM1-211ENST00000449508 EIF5AP63241 154 aaKnown RBP9.06□□□□□ -0.96
TOM1-211ENST00000449508 RPL19P84098 196 aaKnown RBP9.06□□□□□ -0.96
TOM1-211ENST00000449508 KCNIP4Q6PIL6 250 aa9.06□□□□□ -0.96
TOM1-211ENST00000449508 BAGE2Q86Y30 109 aa9.06□□□□□ -0.96
TOM1-211ENST00000449508 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
TOM1-211ENST00000449508 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 SCO2A0A1W2PP80 73 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 RAB4BP61018 213 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 UBE2D3P61077 147 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 UBE2D2P62837 147 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 ELOBQ15370 118 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
TOM1-211ENST00000449508 TMEM262E9PQX1 116 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 ZNF56Q15929 161 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 OR10AG1Q8NH19 301 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 UBE2WQ96B02 151 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 HERC1Q15751 4861 aa9.04□□□□□ -0.96
TOM1-211ENST00000449508 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 RBFOX3A6NFN3 312 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 CXCL1P09341 107 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 SSTP61278 116 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 SPANXN1Q5VSR9 72 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 Q8N976 141 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 CHCHD7Q9BUK0 85 aa9.03□□□□□ -0.96
TOM1-211ENST00000449508 F5H697 171 aa9.02□□□□□ -0.97
TOM1-211ENST00000449508 SNAI2O43623 268 aa9.02□□□□□ -0.97
TOM1-211ENST00000449508 NEXN-AS1Q8NBZ9 246 aa9.02□□□□□ -0.97
TOM1-211ENST00000449508 SSBP4Q9BWG4 385 aaPredicted RBP9.02□□□□□ -0.97
TOM1-211ENST00000449508 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
TOM1-211ENST00000449508 OR5AL1P0C617 328 aa9.01□□□□□ -0.97
TOM1-211ENST00000449508 Q0VG73 95 aa9.01□□□□□ -0.97
TOM1-211ENST00000449508 LINC01620Q4KN68 170 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms