RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TMSB15BA0A087X1C1 80 aa18.67■□□□□ 0.58
CBX4-202ENST00000448310 RHODO00212 210 aa18.67■□□□□ 0.58
CBX4-202ENST00000448310 TOR2AQ5JU69 321 aa18.67■□□□□ 0.58
CBX4-202ENST00000448310 NKX6-2Q9C056 277 aaPredicted RBP18.67■□□□□ 0.58
CBX4-202ENST00000448310 MAP1LC3B2A6NCE7 125 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 M0R381 172 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 LINC01620Q4KN68 170 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 FAM162BQ5T6X4 162 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 Q6ZSA8 131 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 MAP1LC3BQ9GZQ8 125 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 BATF3Q9NR55 127 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 ZFP30Q9Y2G7 519 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 PHLDA3Q9Y5J5 127 aa18.65■□□□□ 0.58
CBX4-202ENST00000448310 UBE2G1P62253 170 aa18.64■□□□□ 0.57
CBX4-202ENST00000448310 COX8CQ7Z4L0 72 aa18.64■□□□□ 0.57
CBX4-202ENST00000448310 NIT1Q86X76 327 aa18.64■□□□□ 0.57
CBX4-202ENST00000448310 SFRP2Q96HF1 295 aa18.64■□□□□ 0.57
CBX4-202ENST00000448310 FMC1Q96HJ9 113 aa18.64■□□□□ 0.57
CBX4-202ENST00000448310 URGCP-MRPS24S4R325 110 aa18.64■□□□□ 0.57
CBX4-202ENST00000448310 TPT1P13693 172 aaKnown RBP18.63■□□□□ 0.57
CBX4-202ENST00000448310 G3V3Q6 166 aa18.62■□□□□ 0.57
CBX4-202ENST00000448310 ZNF674Q2M3X9 581 aa18.62■□□□□ 0.57
CBX4-202ENST00000448310 KLK12Q9UKR0 248 aa18.62■□□□□ 0.57
CBX4-202ENST00000448310 IGKV2D-24A0A075B6R9 120 aa18.61■□□□□ 0.57
CBX4-202ENST00000448310 CYTL1Q9NRR1 136 aa18.61■□□□□ 0.57
CBX4-202ENST00000448310 LINC01559Q495D7 138 aa18.6■□□□□ 0.57
CBX4-202ENST00000448310 CST9LP1Q5W188 147 aa18.6■□□□□ 0.57
CBX4-202ENST00000448310 LINC00528Q8N1L1 170 aa18.6■□□□□ 0.57
CBX4-202ENST00000448310 COX11Q9Y6N1 276 aa18.6■□□□□ 0.57
CBX4-202ENST00000448310 ARPC5O15511 151 aa18.59■□□□□ 0.57
CBX4-202ENST00000448310 LTAP01374 205 aa18.59■□□□□ 0.57
CBX4-202ENST00000448310 RMI2Q96E14 147 aa18.59■□□□□ 0.57
CBX4-202ENST00000448310 FHITP49789 147 aa18.58■□□□□ 0.56
CBX4-202ENST00000448310 ZFP82Q8N141 532 aa18.58■□□□□ 0.56
CBX4-202ENST00000448310 UBE2WQ96B02 151 aa18.58■□□□□ 0.56
CBX4-202ENST00000448310 TRBV6-1A0A0K0K1D8 114 aa18.57■□□□□ 0.56
CBX4-202ENST00000448310 PLA2G1BP04054 148 aaKnown RBP18.57■□□□□ 0.56
CBX4-202ENST00000448310 AKR1C3P42330 323 aa18.57■□□□□ 0.56
CBX4-202ENST00000448310 A0A087WX48 190 aa18.56■□□□□ 0.56
CBX4-202ENST00000448310 RBFOX3A6NFN3 312 aa18.56■□□□□ 0.56
CBX4-202ENST00000448310 J3QL48 77 aa18.55■□□□□ 0.56
CBX4-202ENST00000448310 UBE2D3P61077 147 aa18.55■□□□□ 0.56
CBX4-202ENST00000448310 UBE2D2P62837 147 aa18.55■□□□□ 0.56
CBX4-202ENST00000448310 RPL36AP83881 106 aaKnown RBP18.55■□□□□ 0.56
CBX4-202ENST00000448310 Q8N976 141 aa18.55■□□□□ 0.56
CBX4-202ENST00000448310 STOML3Q8TAV4 291 aa18.55■□□□□ 0.56
CBX4-202ENST00000448310 RPL36ALQ969Q0 106 aaKnown RBP18.55■□□□□ 0.56
CBX4-202ENST00000448310 TRBV10-1A0A0K0K1A3 114 aa18.54■□□□□ 0.56
CBX4-202ENST00000448310 SEC11BP0C7V7 166 aa18.54■□□□□ 0.56
CBX4-202ENST00000448310 SCXQ7RTU7 201 aa18.54■□□□□ 0.56
CBX4-202ENST00000448310 TCEAL7Q9BRU2 100 aa18.54■□□□□ 0.56
CBX4-202ENST00000448310 TRBV7-3A0A075B6L6 115 aa18.53■□□□□ 0.56
CBX4-202ENST00000448310 PAGE4O60829 102 aa18.53■□□□□ 0.56
CBX4-202ENST00000448310 RPL19P84098 196 aaKnown RBP18.53■□□□□ 0.56
CBX4-202ENST00000448310 SMLR1H3BR10 107 aa18.52■□□□□ 0.56
CBX4-202ENST00000448310 KCNIP4Q6PIL6 250 aa18.52■□□□□ 0.56
CBX4-202ENST00000448310 A0A1B0GV50 99 aa18.51■□□□□ 0.55
CBX4-202ENST00000448310 OR10AG1Q8NH19 301 aa18.51■□□□□ 0.55
CBX4-202ENST00000448310 CHCHD7Q9BUK0 85 aa18.51■□□□□ 0.55
CBX4-202ENST00000448310 ELOBQ15370 118 aa18.5■□□□□ 0.55
CBX4-202ENST00000448310 TMEM262E9PQX1 116 aa18.49■□□□□ 0.55
CBX4-202ENST00000448310 ZNF56Q15929 161 aa18.49■□□□□ 0.55
CBX4-202ENST00000448310 OR10G8Q8NGN5 311 aa18.49■□□□□ 0.55
CBX4-202ENST00000448310 SCO2A0A1W2PP80 73 aa18.48■□□□□ 0.55
CBX4-202ENST00000448310 ATRAIDQ6UW56 229 aa18.48■□□□□ 0.55
CBX4-202ENST00000448310 NEXN-AS1Q8NBZ9 246 aa18.48■□□□□ 0.55
CBX4-202ENST00000448310 MUC21A0A0G2JKD1 596 aa18.47■□□□□ 0.55
CBX4-202ENST00000448310 MUC21A0A140T8X8 626 aa18.47■□□□□ 0.55
CBX4-202ENST00000448310 RAB4BP61018 213 aa18.47■□□□□ 0.55
CBX4-202ENST00000448310 FAM213BQ8TBF2 198 aa18.47■□□□□ 0.55
CBX4-202ENST00000448310 SFT2D1Q8WV19 159 aa18.47■□□□□ 0.55
CBX4-202ENST00000448310 TRBV6-8A0A0A6YYG3 113 aa18.46■□□□□ 0.55
CBX4-202ENST00000448310 Q0VG73 95 aa18.45■□□□□ 0.54
CBX4-202ENST00000448310 MPV17L2Q567V2 206 aa18.45■□□□□ 0.54
CBX4-202ENST00000448310 ENHOQ6UWT2 76 aa18.45■□□□□ 0.54
CBX4-202ENST00000448310 C15orf54Q8N8G6 183 aa18.45■□□□□ 0.54
CBX4-202ENST00000448310 CHAC1Q9BUX1 264 aa18.45■□□□□ 0.54
CBX4-202ENST00000448310 SSTP61278 116 aa18.44■□□□□ 0.54
CBX4-202ENST00000448310 PRR27Q6MZM9 219 aa18.44■□□□□ 0.54
CBX4-202ENST00000448310 DEFB104AQ8WTQ1 72 aa18.44■□□□□ 0.54
CBX4-202ENST00000448310 MBD3L1Q8WWY6 194 aa18.44■□□□□ 0.54
CBX4-202ENST00000448310 MLST8Q9BVC4 326 aa18.44■□□□□ 0.54
CBX4-202ENST00000448310 C1orf43Q9BWL3 253 aa18.44■□□□□ 0.54
CBX4-202ENST00000448310 ZNF471Q9BX82 626 aaPredicted RBP18.44■□□□□ 0.54
CBX4-202ENST00000448310 S100A9P06702 114 aaKnown RBP18.43■□□□□ 0.54
CBX4-202ENST00000448310 RGS21Q2M5E4 152 aa18.43■□□□□ 0.54
CBX4-202ENST00000448310 BAGE2Q86Y30 109 aa18.43■□□□□ 0.54
CBX4-202ENST00000448310 KCNRGQ8N5I3 272 aa18.43■□□□□ 0.54
CBX4-202ENST00000448310 KRTAP29-1A8MX34 341 aaPredicted RBP18.42■□□□□ 0.54
CBX4-202ENST00000448310 CRPP02741 224 aa18.42■□□□□ 0.54
CBX4-202ENST00000448310 CXCL1P09341 107 aa18.42■□□□□ 0.54
CBX4-202ENST00000448310 CIRBP-AS1Q8TBR5 109 aa18.42■□□□□ 0.54
CBX4-202ENST00000448310 LRP1Q07954 4544 aaKnown RBP18.42■□□□□ 0.54
CBX4-202ENST00000448310 SNAI2O43623 268 aa18.41■□□□□ 0.54
CBX4-202ENST00000448310 PFDN1O60925 122 aa18.41■□□□□ 0.54
CBX4-202ENST00000448310 ANGP03950 147 aaKnown RBP18.41■□□□□ 0.54
CBX4-202ENST00000448310 SPANXN1Q5VSR9 72 aa18.41■□□□□ 0.54
CBX4-202ENST00000448310 CHCHD5Q9BSY4 110 aa18.41■□□□□ 0.54
CBX4-202ENST00000448310 F5H697 171 aa18.4■□□□□ 0.54
CBX4-202ENST00000448310 SSBP4Q9BWG4 385 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms