RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 A0A0J9YWU9 116 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 NHLRC4P0CG21 123 aaPredicted RBP13.92□□□□□ -0.18
SGCE-207ENST00000447873 RPS10P46783 165 aaKnown RBP13.92□□□□□ -0.18
SGCE-207ENST00000447873 FAM74A4Q5TZK3 123 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 GATD1Q8NB37 220 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 DPH3P1Q9H4G8 78 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 HUWE1Q7Z6Z7 4374 aaKnown RBP13.92□□□□□ -0.18
SGCE-207ENST00000447873 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 MT-ND6P03923 174 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 CFAP126Q5VTH2 177 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 LINC00612Q8N6U2 182 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 SAMD10Q9BYL1 202 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 CELA1Q9UNI1 258 aa13.92□□□□□ -0.18
SGCE-207ENST00000447873 COL7A1Q02388 2944 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 TEX48A0A1B0GUV7 120 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 RS1O15537 224 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 AMN1Q8IY45 258 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 OR4C5Q8NGB2 326 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 FRZBQ92765 325 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 KIF25-AS1Q9Y6Z4 181 aa13.91□□□□□ -0.18
SGCE-207ENST00000447873 NACAE9PAV3 2078 aa13.9□□□□□ -0.18
SGCE-207ENST00000447873 CRYGDP07320 174 aa13.9□□□□□ -0.18
SGCE-207ENST00000447873 PRKDCP78527 4128 aaKnown RBP13.9□□□□□ -0.18
SGCE-207ENST00000447873 TRAV4A0A0B4J268 109 aa13.89□□□□□ -0.19
SGCE-207ENST00000447873 DAD1P61803 113 aa13.89□□□□□ -0.19
SGCE-207ENST00000447873 FAM104BQ5XKR9 115 aa13.89□□□□□ -0.19
SGCE-207ENST00000447873 POM121L12Q8N7R1 296 aa13.89□□□□□ -0.19
SGCE-207ENST00000447873 APCSP02743 223 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 MGPP08493 103 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 C18orf15Q96N68 181 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 MRPL18Q9H0U6 180 aaKnown RBP13.88□□□□□ -0.19
SGCE-207ENST00000447873 IGHV3-73A0A0B4J1V6 119 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 F5H697 171 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 RHODO00212 210 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 SLAQ13239 276 aa13.88□□□□□ -0.19
SGCE-207ENST00000447873 RAB4AP20338 218 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 LINC00315P59091 139 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 FABP9Q0Z7S8 132 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 ZNF56Q15929 161 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 ZFP2Q6ZN57 461 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 RNF185Q96GF1 192 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
SGCE-207ENST00000447873 UFSP1Q6NVU6 142 aa13.86□□□□□ -0.19
SGCE-207ENST00000447873 TRGC2P03986 189 aa13.85□□□□□ -0.19
SGCE-207ENST00000447873 MRPL51Q4U2R6 128 aaKnown RBP13.85□□□□□ -0.19
SGCE-207ENST00000447873 C11orf45Q8TAV5 145 aa13.85□□□□□ -0.19
SGCE-207ENST00000447873 CIDEAO60543 219 aa13.84□□□□□ -0.19
SGCE-207ENST00000447873 C12orf74Q32Q52 190 aa13.83□□□□□ -0.19
SGCE-207ENST00000447873 KIAA1644Q3SXP7 199 aa13.83□□□□□ -0.19
SGCE-207ENST00000447873 TRAV26-2A0A0B4J265 109 aa13.83□□□□□ -0.2
SGCE-207ENST00000447873 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
SGCE-207ENST00000447873 ATP5G1P05496 136 aa13.83□□□□□ -0.2
SGCE-207ENST00000447873 CKS2P33552 79 aa13.83□□□□□ -0.2
SGCE-207ENST00000447873 SUMO4Q6EEV6 95 aa13.82□□□□□ -0.2
SGCE-207ENST00000447873 MRAP2Q96G30 205 aa13.82□□□□□ -0.2
SGCE-207ENST00000447873 FBN3Q75N90 2809 aa13.81□□□□□ -0.2
SGCE-207ENST00000447873 D6R8Y8 96 aa13.81□□□□□ -0.2
SGCE-207ENST00000447873 PPBPP02775 128 aa13.81□□□□□ -0.2
SGCE-207ENST00000447873 ORMDL3Q8N138 153 aa13.81□□□□□ -0.2
SGCE-207ENST00000447873 U3KQK5 164 aa13.81□□□□□ -0.2
SGCE-207ENST00000447873 STAB2Q8WWQ8 2551 aa13.81□□□□□ -0.2
SGCE-207ENST00000447873 SMKR1H3BMG3 65 aa13.8□□□□□ -0.2
SGCE-207ENST00000447873 NCR2O95944 276 aa13.8□□□□□ -0.2
SGCE-207ENST00000447873 NANOS2P60321 138 aaKnown RBP13.8□□□□□ -0.2
SGCE-207ENST00000447873 FHL2Q14192 279 aa13.8□□□□□ -0.2
SGCE-207ENST00000447873 H7C1H1 209 aa13.79□□□□□ -0.2
SGCE-207ENST00000447873 HTN3P15516 51 aa13.79□□□□□ -0.2
SGCE-207ENST00000447873 Q6ZSN1 163 aa13.79□□□□□ -0.2
SGCE-207ENST00000447873 GAS8-AS1O95177 125 aa13.79□□□□□ -0.2
SGCE-207ENST00000447873 HOXA5P20719 270 aa13.79□□□□□ -0.2
SGCE-207ENST00000447873 Q6ZTC4 211 aa13.79□□□□□ -0.2
SGCE-207ENST00000447873 F5H768 121 aa13.78□□□□□ -0.2
SGCE-207ENST00000447873 M0QY20 66 aa13.78□□□□□ -0.2
SGCE-207ENST00000447873 GATA1P15976 413 aaPredicted RBP13.78□□□□□ -0.2
SGCE-207ENST00000447873 SRIP30626 198 aa13.78□□□□□ -0.2
SGCE-207ENST00000447873 PRELID3AQ96N28 172 aa13.78□□□□□ -0.2
SGCE-207ENST00000447873 HHLA3Q9XRX5 114 aa13.78□□□□□ -0.2
SGCE-207ENST00000447873 PHOX2AO14813 284 aa13.77□□□□□ -0.21
SGCE-207ENST00000447873 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
SGCE-207ENST00000447873 ALKBH7Q9BT30 221 aaPredicted RBP13.77□□□□□ -0.21
SGCE-207ENST00000447873 EDA2RQ9HAV5 297 aa13.77□□□□□ -0.21
SGCE-207ENST00000447873 TRBV6-4A0A1B0GX49 114 aa13.76□□□□□ -0.21
SGCE-207ENST00000447873 C1orf196B1AJZ1 125 aa13.76□□□□□ -0.21
SGCE-207ENST00000447873 K7EQD1 137 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 PPP1R17O96001 155 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 RPL39LQ96EH5 51 aaKnown RBP13.75□□□□□ -0.21
SGCE-207ENST00000447873 PRO0255Q9UI72 69 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 TNFRSF6BO95407 300 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 P0DMU3 169 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 FAM231AP0DMU4 169 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 FAM231CP0DMU5 169 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 OR10J3Q5JRS4 329 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 NRACQ8N912 160 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 NIT2Q9NQR4 276 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 LAMTOR2Q9Y2Q5 125 aa13.75□□□□□ -0.21
SGCE-207ENST00000447873 NPYP01303 97 aa13.74□□□□□ -0.21
SGCE-207ENST00000447873 CRYBA4P53673 196 aa13.74□□□□□ -0.21
SGCE-207ENST00000447873 RHOHQ15669 191 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms