RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 A0A087WWL8 130 aa12.84□□□□□ -0.35
SMC6-206ENST00000446852 PROK1P58294 105 aa12.84□□□□□ -0.35
SMC6-206ENST00000446852 SUMO2P61956 95 aaKnown RBP12.84□□□□□ -0.35
SMC6-206ENST00000446852 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
SMC6-206ENST00000446852 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
SMC6-206ENST00000446852 LAGE3Q14657 143 aa12.83□□□□□ -0.36
SMC6-206ENST00000446852 HIVEP1P15822 2718 aa12.83□□□□□ -0.36
SMC6-206ENST00000446852 TRAV25A0A0B4J276 109 aa12.83□□□□□ -0.36
SMC6-206ENST00000446852 SMIM17P0DL12 118 aa12.83□□□□□ -0.36
SMC6-206ENST00000446852 JMJD1CQ15652 2540 aa12.83□□□□□ -0.36
SMC6-206ENST00000446852 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
SMC6-206ENST00000446852 LGALS9CQ6DKI2 356 aa12.82□□□□□ -0.36
SMC6-206ENST00000446852 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
SMC6-206ENST00000446852 Q6ZN92 141 aa12.82□□□□□ -0.36
SMC6-206ENST00000446852 ST20Q9HBF5 79 aa12.82□□□□□ -0.36
SMC6-206ENST00000446852 TP73-AS1Q9UF72 201 aa12.82□□□□□ -0.36
SMC6-206ENST00000446852 CBY3A6NI87 242 aa12.81□□□□□ -0.36
SMC6-206ENST00000446852 M0R143 59 aa12.81□□□□□ -0.36
SMC6-206ENST00000446852 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
SMC6-206ENST00000446852 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
SMC6-206ENST00000446852 C2orf88Q9BSF0 95 aa12.81□□□□□ -0.36
SMC6-206ENST00000446852 GOLT1BQ9Y3E0 138 aa12.81□□□□□ -0.36
SMC6-206ENST00000446852 PRM2P04554 102 aa12.8□□□□□ -0.36
SMC6-206ENST00000446852 HTN1P15515 57 aa12.8□□□□□ -0.36
SMC6-206ENST00000446852 JMJD8Q96S16 334 aa12.8□□□□□ -0.36
SMC6-206ENST00000446852 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
SMC6-206ENST00000446852 FAM74A4Q5TZK3 123 aa12.8□□□□□ -0.36
SMC6-206ENST00000446852 SYT8Q8NBV8 401 aa12.8□□□□□ -0.36
SMC6-206ENST00000446852 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
SMC6-206ENST00000446852 INAFM1C9JVW0 142 aa12.79□□□□□ -0.36
SMC6-206ENST00000446852 NSUN5P1Q3KNT7 163 aa12.79□□□□□ -0.36
SMC6-206ENST00000446852 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
SMC6-206ENST00000446852 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
SMC6-206ENST00000446852 C2CD3Q4AC94 2353 aa12.79□□□□□ -0.36
SMC6-206ENST00000446852 FN1P02751 2386 aaKnown RBP12.78□□□□□ -0.36
SMC6-206ENST00000446852 CRYGDP07320 174 aa12.78□□□□□ -0.36
SMC6-206ENST00000446852 KRTAP10-3P60369 221 aa12.78□□□□□ -0.36
SMC6-206ENST00000446852 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
SMC6-206ENST00000446852 F5H697 171 aa12.78□□□□□ -0.36
SMC6-206ENST00000446852 SAP30O75446 220 aa12.78□□□□□ -0.36
SMC6-206ENST00000446852 NACAE9PAV3 2078 aa12.77□□□□□ -0.36
SMC6-206ENST00000446852 NUDT3O95989 172 aa12.77□□□□□ -0.37
SMC6-206ENST00000446852 PPP1R17O96001 155 aa12.77□□□□□ -0.37
SMC6-206ENST00000446852 MRPL52Q86TS9 123 aaKnown RBP12.77□□□□□ -0.37
SMC6-206ENST00000446852 CSTL1Q9H114 145 aa12.77□□□□□ -0.37
SMC6-206ENST00000446852 A0A1B0GV90 55 aa12.77□□□□□ -0.37
SMC6-206ENST00000446852 NEGR1Q7Z3B1 354 aa12.77□□□□□ -0.37
SMC6-206ENST00000446852 ODF1Q14990 250 aa12.76□□□□□ -0.37
SMC6-206ENST00000446852 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
SMC6-206ENST00000446852 ORMDL2Q53FV1 153 aa12.76□□□□□ -0.37
SMC6-206ENST00000446852 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
SMC6-206ENST00000446852 PRSS1P07477 247 aa12.75□□□□□ -0.37
SMC6-206ENST00000446852 ZNF56Q15929 161 aa12.75□□□□□ -0.37
SMC6-206ENST00000446852 K7EMI3 77 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 ATP5LO75964 103 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 INSP01308 110 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 ANKRD39Q53RE8 183 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 IGLV1-51P01701 117 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
SMC6-206ENST00000446852 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
SMC6-206ENST00000446852 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
SMC6-206ENST00000446852 STHQ8IWL8 128 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 STPG4Q8N801 248 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 TENM1Q9UKZ4 2725 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 VWFP04275 2813 aa12.74□□□□□ -0.37
SMC6-206ENST00000446852 M0QY20 66 aa12.73□□□□□ -0.37
SMC6-206ENST00000446852 RPL32P62910 135 aaKnown RBP12.73□□□□□ -0.37
SMC6-206ENST00000446852 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
SMC6-206ENST00000446852 MRPS16Q9Y3D3 137 aaKnown RBP12.73□□□□□ -0.37
SMC6-206ENST00000446852 BATFQ16520 125 aa12.73□□□□□ -0.37
SMC6-206ENST00000446852 TOMM6Q96B49 74 aa12.73□□□□□ -0.37
SMC6-206ENST00000446852 LINC01587Q99440 93 aa12.73□□□□□ -0.37
SMC6-206ENST00000446852 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
SMC6-206ENST00000446852 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
SMC6-206ENST00000446852 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
SMC6-206ENST00000446852 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
SMC6-206ENST00000446852 LINC00467Q9BRT7 94 aa12.72□□□□□ -0.37
SMC6-206ENST00000446852 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.37
SMC6-206ENST00000446852 TCTAP57738 103 aa12.71□□□□□ -0.37
SMC6-206ENST00000446852 TRBV6-5A0A0K0K1A5 114 aa12.71□□□□□ -0.37
SMC6-206ENST00000446852 ZNF415Q09FC8 603 aa12.71□□□□□ -0.37
SMC6-206ENST00000446852 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.37
SMC6-206ENST00000446852 COX8AP10176 69 aa12.7□□□□□ -0.38
SMC6-206ENST00000446852 NDUFA11Q86Y39 141 aa12.7□□□□□ -0.38
SMC6-206ENST00000446852 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
SMC6-206ENST00000446852 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
SMC6-206ENST00000446852 M0R2P5 195 aa12.7□□□□□ -0.38
SMC6-206ENST00000446852 C1orf158Q8N1D5 194 aa12.69□□□□□ -0.38
SMC6-206ENST00000446852 SCGB3A1Q96QR1 104 aa12.69□□□□□ -0.38
SMC6-206ENST00000446852 NOTCH3Q9UM47 2321 aa12.69□□□□□ -0.38
SMC6-206ENST00000446852 TRBV27A0A0K0K1C4 114 aa12.69□□□□□ -0.38
SMC6-206ENST00000446852 VCYO14598 125 aa12.69□□□□□ -0.38
SMC6-206ENST00000446852 MRPL35Q9NZE8 188 aaKnown RBP12.69□□□□□ -0.38
SMC6-206ENST00000446852 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
SMC6-206ENST00000446852 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 ZFP2Q6ZN57 461 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 C19orf73Q9NVV2 129 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 IGKCP01834 107 aa12.68□□□□□ -0.38
SMC6-206ENST00000446852 FGF6P10767 208 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms