RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 G3V3Q6 166 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 TPT1P13693 172 aaKnown RBP13.98□□□□□ -0.17
VSX1-206ENST00000444511 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 CYTL1Q9NRR1 136 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 M0R381 172 aa13.97□□□□□ -0.17
VSX1-206ENST00000444511 FHITP49789 147 aa13.97□□□□□ -0.17
VSX1-206ENST00000444511 URGCP-MRPS24S4R325 110 aa13.97□□□□□ -0.17
VSX1-206ENST00000444511 A0A087WWL8 130 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 TRBV6-1A0A0K0K1D8 114 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 LTAP01374 205 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 AKR1C3P42330 323 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 WFDC2Q14508 124 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 ZNF674Q2M3X9 581 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 RGS21Q2M5E4 152 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 LINC01559Q495D7 138 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 SFRP2Q96HF1 295 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 LECT2O14960 151 aa13.95□□□□□ -0.18
VSX1-206ENST00000444511 ZFP82Q8N141 532 aa13.95□□□□□ -0.18
VSX1-206ENST00000444511 FAM30AQ9NZY2 134 aa13.94□□□□□ -0.18
VSX1-206ENST00000444511 COX11Q9Y6N1 276 aa13.94□□□□□ -0.18
VSX1-206ENST00000444511 PAGE4O60829 102 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 C1QBP02746 253 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 SEC11BP0C7V7 166 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 NIT1Q86X76 327 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 RMI2Q96E14 147 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.91□□□□□ -0.18
VSX1-206ENST00000444511 TRBV10-1A0A0K0K1A3 114 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 SMLR1H3BR10 107 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
VSX1-206ENST00000444511 SFT2D1Q8WV19 159 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
VSX1-206ENST00000444511 A0A087WX48 190 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 KCNIP4Q6PIL6 250 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 KCNRGQ8N5I3 272 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 FAM213BQ8TBF2 198 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 HERC1Q15751 4861 aa13.9□□□□□ -0.19
VSX1-206ENST00000444511 VPS13BQ7Z7G8 4022 aa13.89□□□□□ -0.19
VSX1-206ENST00000444511 IGKV2D-24A0A075B6R9 120 aa13.89□□□□□ -0.19
VSX1-206ENST00000444511 A0A1B0GV50 99 aa13.89□□□□□ -0.19
VSX1-206ENST00000444511 S100A9P06702 114 aaKnown RBP13.89□□□□□ -0.19
VSX1-206ENST00000444511 DMBT1Q9UGM3 2413 aaPredicted RBP13.88□□□□□ -0.19
VSX1-206ENST00000444511 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 UMAD1C9J7I0 102 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 PFDN1O60925 122 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 ZNF345Q14585 488 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 ELOBQ15370 118 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 CHCHD7Q9BUK0 85 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 SCO2A0A1W2PP80 73 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 UBE2D3P61077 147 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 UBE2D2P62837 147 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
VSX1-206ENST00000444511 DNAJC30Q96LL9 226 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 ZNF56Q15929 161 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 Q6ZSA8 131 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 BAGE2Q86Y30 109 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 Q8N976 141 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 OR10AG1Q8NH19 301 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 ZNF471Q9BX82 626 aaPredicted RBP13.86□□□□□ -0.19
VSX1-206ENST00000444511 SRRM2Q9UQ35 2752 aaKnown RBP13.85□□□□□ -0.19
VSX1-206ENST00000444511 RBFOX3A6NFN3 312 aa13.85□□□□□ -0.19
VSX1-206ENST00000444511 CXCL1P09341 107 aa13.85□□□□□ -0.19
VSX1-206ENST00000444511 RAB4BP61018 213 aa13.85□□□□□ -0.19
VSX1-206ENST00000444511 TMEM262E9PQX1 116 aa13.84□□□□□ -0.19
VSX1-206ENST00000444511 OR10G8Q8NGN5 311 aa13.84□□□□□ -0.19
VSX1-206ENST00000444511 MLST8Q9BVC4 326 aa13.84□□□□□ -0.19
VSX1-206ENST00000444511 A0A0D9SG52 128 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 KANTRA0A1W2PQU2 76 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 H2AFB1P0C5Y9 115 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 LINC01620Q4KN68 170 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 SPANXN1Q5VSR9 72 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 PRR27Q6MZM9 219 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
VSX1-206ENST00000444511 TRBV6-8A0A0A6YYG3 113 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 HMSDA8MTL9 139 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 BCL2L11O43521 198 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 PLA2G1BP04054 148 aaKnown RBP13.82□□□□□ -0.2
VSX1-206ENST00000444511 Q0VG73 95 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 NEXN-AS1Q8NBZ9 246 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 MYCBP2O75592 4640 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 FLG2Q5D862 2391 aaPredicted RBP13.81□□□□□ -0.2
VSX1-206ENST00000444511 MUC21A0A0G2JKD1 596 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 MUC21A0A140T8X8 626 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 SNAI2O43623 268 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
VSX1-206ENST00000444511 TMUB2Q71RG4 321 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 LINC00528Q8N1L1 170 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 DNAH8Q96JB1 4490 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 F5H697 171 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 OR5AL1P0C617 328 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 SSTP61278 116 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 ATRAIDQ6UW56 229 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 SSBP4Q9BWG4 385 aaPredicted RBP13.8□□□□□ -0.2
VSX1-206ENST00000444511 C1orf43Q9BWL3 253 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 CRPP02741 224 aa13.79□□□□□ -0.2
VSX1-206ENST00000444511 SMIM17P0DL12 118 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms