RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 TRBV20OR9-2A0A075B6H5 130 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SNAI2O43623 268 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 NXPH4O95158 308 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 IGLV2-8P01709 118 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SMIM17P0DL12 118 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TEX261Q6UWH6 196 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 FER1L6-AS1Q8NA97 138 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SFRP2Q96HF1 295 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SSBP4Q9BWG4 385 aaPredicted RBP7.14□□□□□ -1.27
HLA-DQB1-206ENST00000443574 FRAS1Q86XX4 4008 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 K7EP13 123 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 CACNG7P62955 275 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 ZNF56Q15929 161 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 LYPD5Q6UWN5 251 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 OR10AG1Q8NH19 301 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SMIM7Q9BQ49 75 aa7.13□□□□□ -1.27
HLA-DQB1-206ENST00000443574 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 A0A087WWL8 130 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TRAV8-6A0A0B4J262 113 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 F2Z2F3 143 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 BTF3P20290 206 aaKnown RBP7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TIRAPP58753 221 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 C6orf223Q8N319 242 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RPP21Q9H633 154 aaKnown RBP7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 LY96Q9Y6Y9 160 aa7.12□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 PRSS29PA6NIE9 313 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 ZNF727A8MUV8 499 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TRGC1P0CF51 173 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 EVI2AP22794 236 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RAB4BP61018 213 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 FAM74A3Q4VXF1 159 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 OR10J3Q5JRS4 329 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 C10orf126Q8N4M7 172 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 ATP6V0E2Q8NHE4 81 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SAMD10Q9BYL1 202 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SMDT1Q9H4I9 107 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 JPT2Q9H910 190 aa7.11□□□□□ -1.27
HLA-DQB1-206ENST00000443574 A0A087WWC5 75 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GAGE12JA6NER3 117 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 F5H697 171 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 H7C1H1 209 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 CRYGDP07320 174 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GZMBP10144 247 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 ERVFC1-1P60608 527 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RAB14P61106 215 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RPL36AP83881 106 aaKnown RBP7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GAGE1Q13065 139 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GAGE4Q13068 117 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GAGE5Q13069 117 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 PEA15Q15121 130 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GAGE13Q4V321 117 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 UFSP1Q6NVU6 142 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 FAM231DQ6ZW35 169 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 OCC1Q8TAD7 63 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RPL36ALQ969Q0 106 aaKnown RBP7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GTSF1LQ9H1H1 148 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 HECTD4Q9Y4D8 3996 aa7.1□□□□□ -1.27
HLA-DQB1-206ENST00000443574 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 LOC100996750A0A140TA64 210 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 K7EN84 100 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RTL8CO15255 209 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 GATCO43716 136 aaKnown RBP7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SRP19P09132 144 aaKnown RBP7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 CTRLP40313 264 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SSTP61278 116 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 CT83Q5H943 113 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 LELP1Q5T871 98 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 SMIM15Q7Z3B0 74 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 ZNF575Q86XF7 245 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 WFDC10BQ8IUB3 73 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 C14orf178Q8N769 122 aaPredicted RBP7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 BORCS7Q96B45 105 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 KRTAP4-6Q9BYQ5 205 aa7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 RNASE7Q9H1E1 156 aaKnown RBP7.09□□□□□ -1.27
HLA-DQB1-206ENST00000443574 IGHV3-38A0A0C4DH36 116 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 MUC21A0A0G2JKD1 596 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 MUC21A0A140T8X8 626 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 A8MWL6 223 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 MGPP08493 103 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 LINC00694P0DN24 101 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 NFE4Q86UQ8 179 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 C15orf54Q8N8G6 183 aa7.08□□□□□ -1.28
HLA-DQB1-206ENST00000443574 TRBV7-3A0A075B6L6 115 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 WDR73Q6P4I2 378 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 KCNIP4Q6PIL6 250 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 LYZL1Q6UWQ5 148 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 Q6ZSN1 163 aa7.07□□□□□ -1.28
HLA-DQB1-206ENST00000443574 LINC01551Q86U37 167 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms