RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 NOP10Q9NPE3 64 aaKnown RBP6.67□□□□□ -1.34
CCDC113-202ENST00000443128 MRPS16Q9Y3D3 137 aaKnown RBP6.67□□□□□ -1.34
CCDC113-202ENST00000443128 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
CCDC113-202ENST00000443128 U3KQE9 123 aa6.67□□□□□ -1.34
CCDC113-202ENST00000443128 DLX4Q92988 240 aaPredicted RBP6.67□□□□□ -1.34
CCDC113-202ENST00000443128 TRBV6-1A0A0K0K1D8 114 aa6.67□□□□□ -1.34
CCDC113-202ENST00000443128 MPV17L2Q567V2 206 aa6.67□□□□□ -1.34
CCDC113-202ENST00000443128 TMEM141Q96I45 108 aa6.67□□□□□ -1.34
CCDC113-202ENST00000443128 CD5LO43866 347 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
CCDC113-202ENST00000443128 SRSF2Q01130 221 aaKnown RBP6.66□□□□□ -1.34
CCDC113-202ENST00000443128 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 C10orf99Q6UWK7 81 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 BBC3Q96PG8 261 aaPredicted RBP6.66□□□□□ -1.34
CCDC113-202ENST00000443128 C19orf71A6NCJ1 209 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 KRTAP10-9P60411 292 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 PMVKQ15126 192 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 CHAC1Q9BUX1 264 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 F8P00451 2351 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 TRBV25-1A0A075B6N4 114 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 PAX2Q02962 417 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 ZFAND3Q9H8U3 227 aa6.66□□□□□ -1.34
CCDC113-202ENST00000443128 TMEM238C9JI98 176 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 NUPR1O60356 82 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 DNAL4O96015 105 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 PLA2G2AP14555 144 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 MYCNOSP40205 109 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 NPC2P61916 151 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 COA6Q5JTJ3 125 aaKnown RBP6.65□□□□□ -1.34
CCDC113-202ENST00000443128 LINC00322Q6ZN03 302 aaPredicted RBP6.65□□□□□ -1.34
CCDC113-202ENST00000443128 Q8N1Y9 231 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 C20orf144Q9BQM9 153 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 MORN3Q6PF18 240 aaPredicted RBP6.65□□□□□ -1.34
CCDC113-202ENST00000443128 RASL10AQ92737 203 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 TRBV7-9A0A0J9YWB2 115 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 ZNF493Q6ZR52 646 aa6.65□□□□□ -1.34
CCDC113-202ENST00000443128 AVPP01185 164 aa6.65□□□□□ -1.35
CCDC113-202ENST00000443128 LINC00158P58513 81 aa6.65□□□□□ -1.35
CCDC113-202ENST00000443128 LGALS9BQ3B8N2 356 aa6.65□□□□□ -1.35
CCDC113-202ENST00000443128 LGALS9CQ6DKI2 356 aa6.65□□□□□ -1.35
CCDC113-202ENST00000443128 RPL39LQ96EH5 51 aaKnown RBP6.65□□□□□ -1.35
CCDC113-202ENST00000443128 MRPL35Q9NZE8 188 aaKnown RBP6.65□□□□□ -1.35
CCDC113-202ENST00000443128 A0A0J9YX75 114 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 ESDP10768 282 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
CCDC113-202ENST00000443128 CKS1BP61024 79 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 RNF152Q8N8N0 203 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 TRAV25A0A0B4J276 109 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 HLA-DRB4P13762 266 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 HLA-DRB4X5D2U9 266 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 ADAMTSL5Q6ZMM2 481 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 Q6ZS46 218 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 IGLL1P15814 213 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 CTRLP40313 264 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 Q6ZSV7 163 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 ZNF747Q9BV97 191 aa6.64□□□□□ -1.35
CCDC113-202ENST00000443128 INAFM1C9JVW0 142 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 NAA38Q9BRA0 125 aaKnown RBP6.63□□□□□ -1.35
CCDC113-202ENST00000443128 TMEM243Q9BU79 118 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 A0A096LPF7 62 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 MLST8Q9BVC4 326 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 IGLC3P0DOY3 106 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 GAGE6Q13070 117 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 SS18Q15532 418 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 C6orf226Q5I0X4 101 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 UBE2DNLQ8IWF7 75 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 ZNF479Q96JC4 524 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 DKK2Q9UBU2 259 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 ITPR3Q14573 2671 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 F8VRH5 84 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 SMAD5-AS1Q9Y6J3 95 aa6.63□□□□□ -1.35
CCDC113-202ENST00000443128 TEP1Q99973 2627 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RBMY1BA6NDE4 496 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RBMY1EA6NEQ0 496 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RBMY1DP0C7P1 496 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 PRIMA1Q86XR5 153 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 LGALS9O00182 355 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 PSMB8P28062 276 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RNASE13Q5GAN3 156 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 CDPF1Q6NVV7 123 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 ZNF702PQ9H963 129 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 MAP6D1Q9H9H5 199 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 FLNAP21333 2647 aaKnown RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RAI1Q7Z5J4 1906 aaPredicted RBP6.62□□□□□ -1.35
CCDC113-202ENST00000443128 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 RHOHQ15669 191 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 MAJINQ3KP22 176 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 HIST2H2BDQ6DRA6 164 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
CCDC113-202ENST00000443128 VWC2LB2RUY7 222 aa6.61□□□□□ -1.35
CCDC113-202ENST00000443128 C16orf74Q96GX8 76 aa6.61□□□□□ -1.35
CCDC113-202ENST00000443128 ATRQ13535 2644 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms