RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PSMG4Q5JS54 123 aa10.69□□□□□ -0.7
MCF2L-218ENST00000442625 EEF1AKMT3Q96AZ1 226 aa10.69□□□□□ -0.7
MCF2L-218ENST00000442625 DUSP14O95147 198 aaKnown RBP10.68□□□□□ -0.7
MCF2L-218ENST00000442625 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
MCF2L-218ENST00000442625 DUX3Q96PT4 197 aa10.68□□□□□ -0.7
MCF2L-218ENST00000442625 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
MCF2L-218ENST00000442625 J3KT08 172 aa10.68□□□□□ -0.7
MCF2L-218ENST00000442625 NDUFV3P56181 108 aaKnown RBP10.68□□□□□ -0.7
MCF2L-218ENST00000442625 V9GYY9 64 aa10.68□□□□□ -0.7
MCF2L-218ENST00000442625 CUBNO60494 3623 aa10.68□□□□□ -0.7
MCF2L-218ENST00000442625 TRBV12-3P01733 135 aa10.67□□□□□ -0.7
MCF2L-218ENST00000442625 UBE2E1P51965 193 aa10.67□□□□□ -0.7
MCF2L-218ENST00000442625 JPT2Q9H910 190 aa10.67□□□□□ -0.7
MCF2L-218ENST00000442625 MUC4Q99102 2169 aa10.67□□□□□ -0.7
MCF2L-218ENST00000442625 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
MCF2L-218ENST00000442625 FOXI1Q12951 378 aa10.67□□□□□ -0.7
MCF2L-218ENST00000442625 RNASE4P34096 147 aaKnown RBP10.66□□□□□ -0.7
MCF2L-218ENST00000442625 CFAP126Q5VTH2 177 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 UNQ9165/PRO28630Q6UXU0 137 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 Q6ZS46 218 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 PHLDA3Q9Y5J5 127 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 TRAV12-1A0A0B4J245 112 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
MCF2L-218ENST00000442625 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
MCF2L-218ENST00000442625 BPESC1Q9GZL8 116 aa10.66□□□□□ -0.7
MCF2L-218ENST00000442625 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
MCF2L-218ENST00000442625 SRD5A1P18405 259 aa10.65□□□□□ -0.7
MCF2L-218ENST00000442625 NBL1P41271 181 aa10.65□□□□□ -0.7
MCF2L-218ENST00000442625 CRYGDP07320 174 aa10.65□□□□□ -0.7
MCF2L-218ENST00000442625 ORMDL2Q53FV1 153 aa10.65□□□□□ -0.7
MCF2L-218ENST00000442625 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
MCF2L-218ENST00000442625 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 TRBV7-1A0A0A6YYK4 115 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 C9JAW5 83 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 C5orf56Q8N8D9 126 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 TMEM101Q96IK0 257 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 TSHBP01222 138 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 TINCRA0A1B0GVN0 87 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 NPFFO15130 113 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 GPHB5Q86YW7 130 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 DLX4Q92988 240 aaPredicted RBP10.64□□□□□ -0.71
MCF2L-218ENST00000442625 CARD19Q96LW7 228 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 KIR2DL4Q99706 377 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 U3KQE9 123 aa10.64□□□□□ -0.71
MCF2L-218ENST00000442625 TRBV20-1A0A075B6N2 111 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 COX6B1P14854 86 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 DPH3P1Q9H4G8 78 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 SORL1Q92673 2214 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 A0A087WWL8 130 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 TP53TG1Q9Y2A0 90 aa10.63□□□□□ -0.71
MCF2L-218ENST00000442625 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 A0A0U1RRA0 63 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 TCL1BO95988 128 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 RHODO00212 210 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 ASIPP42127 132 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 UBE2D1P51668 147 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 LMO4P61968 165 aa10.62□□□□□ -0.71
MCF2L-218ENST00000442625 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
MCF2L-218ENST00000442625 OPRPNQ99935 248 aaPredicted RBP10.62□□□□□ -0.71
MCF2L-218ENST00000442625 CSMD2Q7Z408 3487 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 CD7P09564 240 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 TIRAPP58753 221 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 TTC32Q5I0X7 151 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 ITLN2Q8WWU7 325 aaPredicted RBP10.61□□□□□ -0.71
MCF2L-218ENST00000442625 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 H7C2G1 150 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
MCF2L-218ENST00000442625 IFITM1P13164 125 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 CELSR2Q9HCU4 2923 aa10.61□□□□□ -0.71
MCF2L-218ENST00000442625 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 A0A0J9YY99 117 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 KLRB1Q12918 225 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 LY6EQ16553 131 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 KLK9Q2XQG4 91 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 C9orf139Q6ZV77 190 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 NDUFA11Q86Y39 141 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 OR10J6PQ8NGY7 276 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
MCF2L-218ENST00000442625 CFC1BP0CG36 223 aa10.59□□□□□ -0.71
MCF2L-218ENST00000442625 CFC1P0CG37 223 aa10.59□□□□□ -0.71
MCF2L-218ENST00000442625 HIVEP3Q5T1R4 2406 aa10.59□□□□□ -0.71
MCF2L-218ENST00000442625 TRAV21A0A0B4J279 112 aa10.59□□□□□ -0.71
MCF2L-218ENST00000442625 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
MCF2L-218ENST00000442625 A0A1B0GX51 115 aa10.58□□□□□ -0.72
MCF2L-218ENST00000442625 F5H697 171 aa10.58□□□□□ -0.72
MCF2L-218ENST00000442625 CRIP2P52943 208 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-218ENST00000442625 ZNRF2Q8NHG8 242 aa10.58□□□□□ -0.72
MCF2L-218ENST00000442625 LINC01619G3V211 115 aa10.58□□□□□ -0.72
MCF2L-218ENST00000442625 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
MCF2L-218ENST00000442625 EDA2RQ9HAV5 297 aa10.58□□□□□ -0.72
MCF2L-218ENST00000442625 SCGB1C2P0DMR2 95 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 UBE2D3P61077 147 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 UBE2D2P62837 147 aa10.57□□□□□ -0.72
MCF2L-218ENST00000442625 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms