RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 AHCTF1Q8WYP5 2266 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 TRPM7Q96QT4 1865 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV3-35A0A0C4DH35 117 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 M0R378 163 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 SPAG11BQ08648 103 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 Q6ZRU5 148 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 Q8N3U1 123 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 UBE2D4Q9Y2X8 147 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 U3KQK5 164 aa4.24□□□□□ -1.73
PTPRC-209ENST00000442510 CAMTA1Q9Y6Y1 1673 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV3OR16-13A0A075B7E8 117 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV3-74A0A0B4J1X5 117 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 HIGD2BQ4VC39 106 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 TMEM14BQ9NUH8 114 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 SDK1Q7Z5N4 2213 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 ZNF407Q9C0G0 2248 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 TRBV10-1A0A0K0K1A3 114 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 A8MUN3 132 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 LINC00205P59089 165 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 WFDC10AQ9H1F0 79 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 FAM186AA6NE01 2351 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 C16orf97H3BN30 126 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 SP5Q6BEB4 398 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-209ENST00000442510 LINC00322Q6ZN03 302 aaPredicted RBP4.23□□□□□ -1.73
PTPRC-209ENST00000442510 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 ROBO1Q9Y6N7 1651 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 BRCA1P38398 1863 aaKnown RBP4.23□□□□□ -1.73
PTPRC-209ENST00000442510 COX7A1P24310 79 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 FAM167A-AS1Q96KT0 104 aa4.23□□□□□ -1.73
PTPRC-209ENST00000442510 CD59P13987 128 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 PLA2G5P39877 138 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 CEP250Q9BV73 2442 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 ICE1Q9Y2F5 2266 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 Q0VFX4 171 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 ATP1A1-AS1Q5TC04 95 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 PAPPAQ13219 1627 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 BUB1B-PAK6H3BSN5 160 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 K7ERS5 55 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 WT1P19544 449 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-209ENST00000442510 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
PTPRC-209ENST00000442510 RPL39LQ96EH5 51 aaKnown RBP4.22□□□□□ -1.73
PTPRC-209ENST00000442510 S4R3C0 116 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 KIF26AQ9ULI4 1882 aaPredicted RBP4.22□□□□□ -1.73
PTPRC-209ENST00000442510 ANAPC1Q9H1A4 1944 aa4.22□□□□□ -1.73
PTPRC-209ENST00000442510 IGHV3-66A0A0C4DH42 116 aa4.21□□□□□ -1.73
PTPRC-209ENST00000442510 FOLR3P41439 243 aa4.21□□□□□ -1.73
PTPRC-209ENST00000442510 REG3AQ06141 175 aa4.21□□□□□ -1.73
PTPRC-209ENST00000442510 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.21□□□□□ -1.73
PTPRC-209ENST00000442510 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.73
PTPRC-209ENST00000442510 UBR2Q8IWV8 1755 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 H7BZZ5 65 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 C10orf55Q5SWW7 151 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 PATE1Q8WXA2 126 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV1-69P01742 117 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV1-2P23083 117 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 RPL39P62891 51 aaKnown RBP4.21□□□□□ -1.74
PTPRC-209ENST00000442510 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 SPAG11AQ6PDA7 123 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 ZNF295-AS1Q8N0V1 137 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 ITLN2Q8WWU7 325 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-209ENST00000442510 TNRC6BQ9UPQ9 1833 aaKnown RBP4.21□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV1-18A0A0C4DH31 117 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 TRBV6-1A0A0K0K1D8 114 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
PTPRC-209ENST00000442510 WNK2Q9Y3S1 2297 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 FER1L5A0AVI2 2057 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV3OR16-8A0A075B7F1 116 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV3-49A0A0A0MS15 119 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 DKK1O94907 266 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 RFPL3SP0C7P2 107 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 DEFB121Q5J5C9 76 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 DLEC1Q9Y238 1755 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
PTPRC-209ENST00000442510 C9orf116Q5BN46 136 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-209ENST00000442510 MIR7-3HGQ8N6C7 128 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 COX14Q96I36 57 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 FAM30AQ9NZY2 134 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 A0A096LNJ9 63 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-209ENST00000442510 EIF4EBP1Q13541 118 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-209ENST00000442510 LINC01465Q8N7H1 131 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 BTAF1O14981 1849 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 SSC5DA1L4H1 1573 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV7-4-1A0A0J9YVY3 117 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 SLPIP03973 132 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 TRGV3P03979 118 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 IGFL4Q6B9Z1 124 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 COX8CQ7Z4L0 72 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 TMEM167AQ8TBQ9 72 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 LINC00308Q8TCZ7 52 aa4.2□□□□□ -1.74
PTPRC-209ENST00000442510 PKDREJQ9NTG1 2253 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 ADAMTSL3P82987 1691 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 LY6LH3BQJ8 138 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 CCL4L1Q8NHW4 92 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 FOXS1O43638 330 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 HMGA1P17096 107 aaKnown RBP4.19□□□□□ -1.74
PTPRC-209ENST00000442510 CLLU1OSQ5K130 101 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 BPESC1Q9GZL8 116 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 MYO16Q9Y6X6 1858 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms