RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 LGI3Q8N145 548 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 MARCH1Q8TCQ1 289 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 C17orf77Q96MU5 243 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 C18orf15Q96N68 181 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 GPR82Q96P67 336 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 SCGB3A2Q96PL1 93 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 C11orf1Q9H5F2 150 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
HDAC9-215ENST00000441986 TP53TG3Q9ULZ0 132 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 PXMP4Q9Y6I8 212 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
HDAC9-215ENST00000441986 IGKV1D-37A0A075B6S9 117 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 TRAV12-2A0A075B6T6 113 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 TRAV9-2A0A087WT02 112 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 A0A0J9YY99 117 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 NUPR1O60356 82 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 SMR3BP02814 79 aaPredicted RBP4.23□□□□□ -1.73
HDAC9-215ENST00000441986 LINC00315P59091 139 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 ZNF266Q14584 549 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
HDAC9-215ENST00000441986 Q6ZVH6 145 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 FER1L6-AS1Q8NA97 138 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 TRGV9Q99603 122 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 RTBDNQ9BSG5 229 aaPredicted RBP4.23□□□□□ -1.73
HDAC9-215ENST00000441986 SLC25A39Q9BZJ4 359 aaPredicted RBP4.23□□□□□ -1.73
HDAC9-215ENST00000441986 SLC25A22Q9H936 323 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 TNFRSF18Q9Y5U5 241 aa4.23□□□□□ -1.73
HDAC9-215ENST00000441986 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 PIGBOS1A0A0B4J2F0 54 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 SIVA1O15304 175 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 PAGE4O60829 102 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 ORM2P19652 201 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 Q0VG73 95 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 IAH1Q2TAA2 248 aaPredicted RBP4.22□□□□□ -1.73
HDAC9-215ENST00000441986 KCNIP4Q6PIL6 250 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 Q6ZRN7 208 aaPredicted RBP4.22□□□□□ -1.73
HDAC9-215ENST00000441986 LRTM2Q8N967 370 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 C5orf17Q8NAS9 161 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 TMEM263Q8WUH6 116 aaKnown RBP4.22□□□□□ -1.73
HDAC9-215ENST00000441986 MBD3L1Q8WWY6 194 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 TMEM37Q8WXS4 190 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 IL22RA2Q969J5 263 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 TMEM147Q9BVK8 224 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 SMIM3Q9BZL3 60 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 NAA60Q9H7X0 242 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 MANBALQ9NQG1 85 aa4.22□□□□□ -1.73
HDAC9-215ENST00000441986 FAT1Q14517 4588 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 A0A087WTM6 91 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 TRAV8-2A0A0B4J237 113 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 DUXBA0A1W2PPF3 345 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 SNURFLB1AK76 121 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 C17orf112F2Z3M2 114 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 TMEM250H0YL14 139 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 GAGE7O76087 117 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 GAGE12FP0CL80 117 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 GAGE12GP0CL81 117 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 GAGE12IP0CL82 117 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 FUSP35637 526 aaKnown RBP eCLIP4.21□□□□□ -1.74
HDAC9-215ENST00000441986 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.74
HDAC9-215ENST00000441986 KRTAP10-1P60331 282 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 RPL23P62829 140 aaKnown RBP4.21□□□□□ -1.74
HDAC9-215ENST00000441986 HIST1H1AQ02539 215 aaPredicted RBP4.21□□□□□ -1.74
HDAC9-215ENST00000441986 BAXQ07812 192 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 RNF182Q8N6D2 247 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 LINC00612Q8N6U2 182 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 THAP8Q8NA92 274 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 OR8A1Q8NGG7 326 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 OR2G3Q8NGZ4 309 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 MRAP2Q96G30 205 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 SPXQ9BT56 116 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 PARLQ9H300 379 aa4.21□□□□□ -1.74
HDAC9-215ENST00000441986 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 A0A096LPF7 62 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 CRYM-AS1A6NIL9 109 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 USP17L23D6RBM5 183 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 ZNF253O75346 499 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 SERF1AO75920 110 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 LINC00869P0C866 280 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 RPL7P18124 248 aaKnown RBP4.2□□□□□ -1.74
HDAC9-215ENST00000441986 CKS1BP61024 79 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 DAZ2Q13117 558 aaKnown RBP4.2□□□□□ -1.74
HDAC9-215ENST00000441986 PMCHL1Q16048 86 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 MRPL54Q6P161 138 aaKnown RBP4.2□□□□□ -1.74
HDAC9-215ENST00000441986 SFRP2Q96HF1 295 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 SIGMAR1Q99720 223 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 AAMDCQ9H7C9 122 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 RCL1Q9Y2P8 373 aaKnown RBP4.2□□□□□ -1.74
HDAC9-215ENST00000441986 TRAPPC1Q9Y5R8 145 aa4.2□□□□□ -1.74
HDAC9-215ENST00000441986 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
HDAC9-215ENST00000441986 K7EP34 96 aa4.19□□□□□ -1.74
HDAC9-215ENST00000441986 IFNA1P01562 189 aa4.19□□□□□ -1.74
HDAC9-215ENST00000441986 GPX1P07203 203 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms