RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZNF580Q9UK33 172 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 LINC01546A6NGU7 62 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 TNFRSF6BO95407 300 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 GATA1P15976 413 aaPredicted RBP10.7□□□□□ -0.7
LIMD1-202ENST00000440097 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 ZNF575Q86XF7 245 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 TMEM158Q8WZ71 300 aa10.7□□□□□ -0.7
LIMD1-202ENST00000440097 C12orf74Q32Q52 190 aa10.69□□□□□ -0.7
LIMD1-202ENST00000440097 GPHB5Q86YW7 130 aa10.69□□□□□ -0.7
LIMD1-202ENST00000440097 AGRNO00468 2067 aa10.69□□□□□ -0.7
LIMD1-202ENST00000440097 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
LIMD1-202ENST00000440097 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
LIMD1-202ENST00000440097 F6UB75 175 aa10.68□□□□□ -0.7
LIMD1-202ENST00000440097 INSL3P51460 131 aa10.68□□□□□ -0.7
LIMD1-202ENST00000440097 NXT2Q9NPJ8 142 aaKnown RBP10.68□□□□□ -0.7
LIMD1-202ENST00000440097 FN1P02751 2386 aaKnown RBP10.68□□□□□ -0.7
LIMD1-202ENST00000440097 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
LIMD1-202ENST00000440097 WNK1Q9H4A3 2382 aa10.68□□□□□ -0.7
LIMD1-202ENST00000440097 HIVEP2P31629 2446 aa10.68□□□□□ -0.7
LIMD1-202ENST00000440097 ATP5LO75964 103 aa10.67□□□□□ -0.7
LIMD1-202ENST00000440097 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
LIMD1-202ENST00000440097 Q6ZQT7 251 aa10.67□□□□□ -0.7
LIMD1-202ENST00000440097 MRPL35Q9NZE8 188 aaKnown RBP10.67□□□□□ -0.7
LIMD1-202ENST00000440097 ELANEP08246 267 aa10.67□□□□□ -0.7
LIMD1-202ENST00000440097 CKS1BP61024 79 aa10.67□□□□□ -0.7
LIMD1-202ENST00000440097 HIST2H2BDQ6DRA6 164 aa10.67□□□□□ -0.7
LIMD1-202ENST00000440097 TMEM89A2RUT3 159 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 IGHV4OR15-8A0A075B7B6 117 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 A0A087WW49 117 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 K7EMT4 169 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 OVOL1O14753 267 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 LGALS1P09382 135 aaKnown RBP10.66□□□□□ -0.7
LIMD1-202ENST00000440097 HLA-DRB4P13762 266 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 HIST1H4GQ99525 98 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 HLA-DRB4X5D2U9 266 aa10.66□□□□□ -0.7
LIMD1-202ENST00000440097 SOCS3O14543 225 aa10.65□□□□□ -0.7
LIMD1-202ENST00000440097 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
LIMD1-202ENST00000440097 UBE2E2Q96LR5 201 aa10.65□□□□□ -0.7
LIMD1-202ENST00000440097 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
LIMD1-202ENST00000440097 SMR3AQ99954 134 aa10.65□□□□□ -0.7
LIMD1-202ENST00000440097 HIVEP1P15822 2718 aa10.65□□□□□ -0.7
LIMD1-202ENST00000440097 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.71
LIMD1-202ENST00000440097 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.71
LIMD1-202ENST00000440097 ID1P41134 155 aa10.65□□□□□ -0.71
LIMD1-202ENST00000440097 TAL2Q16559 108 aa10.65□□□□□ -0.71
LIMD1-202ENST00000440097 LINC01559Q495D7 138 aa10.65□□□□□ -0.71
LIMD1-202ENST00000440097 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.71
LIMD1-202ENST00000440097 Q8N8P6 123 aa10.64□□□□□ -0.71
LIMD1-202ENST00000440097 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
LIMD1-202ENST00000440097 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
LIMD1-202ENST00000440097 TEX29Q8N6K0 151 aa10.64□□□□□ -0.71
LIMD1-202ENST00000440097 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
LIMD1-202ENST00000440097 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
LIMD1-202ENST00000440097 IGLV2-18A0A075B6J9 118 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 A0A1B0GWB2 263 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 PRR9Q5T870 116 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 SORL1Q92673 2214 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
LIMD1-202ENST00000440097 TCTEX1D4Q5JR98 221 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 C18orf65Q6ZTR6 163 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 MYOZ3Q8TDC0 251 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 C20orf78Q9BR46 151 aa10.63□□□□□ -0.71
LIMD1-202ENST00000440097 DUX3Q96PT4 197 aa10.62□□□□□ -0.71
LIMD1-202ENST00000440097 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
LIMD1-202ENST00000440097 SRSF2Q01130 221 aaKnown RBP10.62□□□□□ -0.71
LIMD1-202ENST00000440097 SCGB2A2Q13296 93 aa10.62□□□□□ -0.71
LIMD1-202ENST00000440097 F8P00451 2351 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 TRAV26-1A0A087WT03 109 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 APOMO95445 188 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 IGKV3-20P01619 116 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
LIMD1-202ENST00000440097 SLURP1P55000 103 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 SPANXN1Q5VSR9 72 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 LENEPQ9Y5L5 61 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 A0A087WX48 190 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
LIMD1-202ENST00000440097 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 H3BVH4 76 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 SNRPD3P62318 126 aaKnown RBP10.6□□□□□ -0.71
LIMD1-202ENST00000440097 LAGE3Q14657 143 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 MRAP2Q96G30 205 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 OR11H1Q8NG94 326 aa10.6□□□□□ -0.71
LIMD1-202ENST00000440097 MORN3Q6PF18 240 aaPredicted RBP10.6□□□□□ -0.71
LIMD1-202ENST00000440097 KLHL30-AS1Q8NEE0 82 aa10.59□□□□□ -0.71
LIMD1-202ENST00000440097 PLNP26678 52 aa10.59□□□□□ -0.71
LIMD1-202ENST00000440097 FOXI1Q12951 378 aa10.59□□□□□ -0.71
LIMD1-202ENST00000440097 SYT8Q8NBV8 401 aa10.59□□□□□ -0.71
LIMD1-202ENST00000440097 GEMIN7Q9H840 131 aaKnown RBP10.59□□□□□ -0.71
LIMD1-202ENST00000440097 CYSLTR1Q9Y271 337 aa10.59□□□□□ -0.71
LIMD1-202ENST00000440097 CRYBA4P53673 196 aa10.58□□□□□ -0.72
LIMD1-202ENST00000440097 Q8N2B8 174 aa10.58□□□□□ -0.72
LIMD1-202ENST00000440097 NRACQ8N912 160 aa10.58□□□□□ -0.72
LIMD1-202ENST00000440097 MYMXA0A1B0GTQ4 84 aa10.58□□□□□ -0.72
LIMD1-202ENST00000440097 M0R381 172 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms