RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 K7EP13 123 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 TNFRSF6BO95407 300 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 LGALS1P09382 135 aaKnown RBP3.55□□□□□ -1.84
EDEM3-203ENST00000439962 ID1P41134 155 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 BEAN1Q3B7T3 259 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 ORMDL2Q53FV1 153 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 SAMD5Q5TGI4 173 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 UNQ9165/PRO28630Q6UXU0 137 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 DYNLRB2Q8TF09 96 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 PEF1Q9UBV8 284 aaKnown RBP3.55□□□□□ -1.84
EDEM3-203ENST00000439962 UFC1Q9Y3C8 167 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 TRAV2A0A0B4J234 112 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 IGKV3D-20A0A0C4DH25 116 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 NPYP01303 97 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 FGF6P10767 208 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 OR2K2Q8NGT1 345 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 C16orf92Q96LL3 132 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 FAM110AQ9BQ89 295 aa3.55□□□□□ -1.84
EDEM3-203ENST00000439962 LGALS9O00182 355 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 CD7P09564 240 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 PLNP26678 52 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 LAGE3Q14657 143 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 DPH3P1Q9H4G8 78 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 DAZ1Q9NQZ3 744 aaKnown RBP3.54□□□□□ -1.84
EDEM3-203ENST00000439962 LYSTQ99698 3801 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 H3BRM9 83 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 LEPP41159 167 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 ASIPP42127 132 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 CD300EQ496F6 205 aaPredicted RBP3.54□□□□□ -1.84
EDEM3-203ENST00000439962 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 PIK3CD-AS1Q5SR53 167 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 LINC00173Q6ZV60 143 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 NRACQ8N912 160 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 EDA2RQ9HAV5 297 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 CBY1Q9Y3M2 126 aa3.54□□□□□ -1.84
EDEM3-203ENST00000439962 hDV102S1A0JD36 115 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 KLLNB2CW77 178 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 DPM2O94777 84 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 CSN3P07498 182 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 NPSP0C0P6 89 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 MAJINQ3KP22 176 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 TMEM97Q5BJF2 176 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 PAPPA-AS1Q5QFB9 102 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 C2orf91Q6ZV80 131 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 ATOH7Q8N100 152 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 ZFAND2AQ8N6M9 145 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 Q8TAT8 98 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 MYOZ3Q8TDC0 251 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 PTH2Q96A98 100 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 TPPP3Q9BW30 176 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 RETNQ9HD89 108 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 KMT2CQ8NEZ4 4911 aaKnown RBP3.53□□□□□ -1.84
EDEM3-203ENST00000439962 PRAC2D3DTV9 90 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 HINT1P49773 126 aaPredicted RBP3.53□□□□□ -1.84
EDEM3-203ENST00000439962 ODF1Q14990 250 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 BATFQ16520 125 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 C9orf66Q5T8R8 295 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 WFDC9Q8NEX5 89 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 OR8A1Q8NGG7 326 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 AP1S3Q96PC3 154 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 SMIM2Q9BVW6 85 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 ZNF256Q9Y2P7 627 aaPredicted RBP3.53□□□□□ -1.84
EDEM3-203ENST00000439962 DNAH9Q9NYC9 4486 aa3.53□□□□□ -1.84
EDEM3-203ENST00000439962 A0A087WX48 190 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 TAX1BP3O14907 124 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 DUSP14O95147 198 aaKnown RBP3.53□□□□□ -1.85
EDEM3-203ENST00000439962 NUDT3O95989 172 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 IGKCP01834 107 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 ERCC8Q13216 396 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 MPV17L2Q567V2 206 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 SPANXN1Q5VSR9 72 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 TOMM6Q96B49 74 aa3.53□□□□□ -1.85
EDEM3-203ENST00000439962 TMSB15BA0A087X1C1 80 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 A8MTW9 85 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 RPL35AP18077 110 aaKnown RBP3.52□□□□□ -1.85
EDEM3-203ENST00000439962 HLA-DMBP28068 263 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 PTTG1IPP53801 180 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 ADAMTSL5Q6ZMM2 481 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 GTF2H5Q6ZYL4 71 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 SBSPONQ8IVN8 264 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 TMEM61Q8N0U2 210 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 RNF182Q8N6D2 247 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 H7C1H1 209 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 NCR2O95944 276 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 OR5A1Q8NGJ0 315 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 LINC00467Q9BRT7 94 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 C11orf21Q9P2W6 132 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 HHLA3Q9XRX5 114 aa3.52□□□□□ -1.85
EDEM3-203ENST00000439962 LOC389332A0A1B0GUA5 103 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 C9orf118A6NHY6 69 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 F8VRH5 84 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.51□□□□□ -1.85
EDEM3-203ENST00000439962 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 SMIM17P0DL12 118 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 IGHV4-30-4P0DP06 118 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 DEFB1P60022 68 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 SUMO2P61956 95 aaKnown RBP3.51□□□□□ -1.85
EDEM3-203ENST00000439962 FHL3Q13643 280 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms