RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TRBV6-5A0A0K0K1A5 114 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 PTTG1IPP53801 180 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
CPNE1-218ENST00000439806 ZNF415Q09FC8 603 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 VAMP3Q15836 100 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 DEFB114Q30KQ6 69 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 ZFP2Q6ZN57 461 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 ERASQ7Z444 233 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 NEXN-AS1Q8NBZ9 246 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 BAALCQ8WXS3 180 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 USP24Q9UPU5 2620 aa7.7□□□□□ -1.18
CPNE1-218ENST00000439806 TRAV25A0A0B4J276 109 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 A0A1W2PRX2 142 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 RBMY1BA6NDE4 496 aaKnown RBP7.69□□□□□ -1.18
CPNE1-218ENST00000439806 RBMY1EA6NEQ0 496 aaKnown RBP7.69□□□□□ -1.18
CPNE1-218ENST00000439806 SDHAF1A6NFY7 115 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 CRYGDP07320 174 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 RBMY1DP0C7P1 496 aaKnown RBP7.69□□□□□ -1.18
CPNE1-218ENST00000439806 HTN1P15515 57 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 SCGB2A2Q13296 93 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 ZNF876PQ49A33 203 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 JMJD8Q96S16 334 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
CPNE1-218ENST00000439806 HIGD1BQ9P298 99 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 TP53TG1Q9Y2A0 90 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 DOPEY2Q9Y3R5 2298 aa7.69□□□□□ -1.18
CPNE1-218ENST00000439806 INSP01308 110 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 RBMY1A1P0DJD3 496 aaKnown RBP7.68□□□□□ -1.18
CPNE1-218ENST00000439806 RBMY1CP0DJD4 496 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 CD28P10747 220 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 RIPPLY3P57055 190 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
CPNE1-218ENST00000439806 RHOHQ15669 191 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 CD300EQ496F6 205 aaPredicted RBP7.68□□□□□ -1.18
CPNE1-218ENST00000439806 HIST2H2BDQ6DRA6 164 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 CHAC1Q9BUX1 264 aa7.68□□□□□ -1.18
CPNE1-218ENST00000439806 ZNF256Q9Y2P7 627 aaPredicted RBP7.68□□□□□ -1.18
CPNE1-218ENST00000439806 TRAV8-6A0A0B4J262 113 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 PRSS29PA6NIE9 313 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 H3BRM9 83 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 M0QY20 66 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 CCL24O00175 119 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 KRTAP1-1Q07627 177 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 PAPPA-AS1Q5QFB9 102 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 C11orf44Q8N8P7 122 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 LINC01587Q99440 93 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 ESM1Q9NQ30 184 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 FAM208BQ5VWN6 2430 aa7.67□□□□□ -1.18
CPNE1-218ENST00000439806 ZNF462Q96JM2 2506 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 TRBV27A0A0K0K1C4 114 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 A8MWV9 139 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 OR11H12B2RN74 326 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 M0R2P5 195 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 RNASE1P07998 156 aaKnown RBP7.66□□□□□ -1.18
CPNE1-218ENST00000439806 GCSHP23434 173 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 HERVK_113P61574 105 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 PMVKQ15126 192 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 NSUN5P1Q3KNT7 163 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 MORN3Q6PF18 240 aaPredicted RBP7.66□□□□□ -1.18
CPNE1-218ENST00000439806 OR11H2Q8NH07 326 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 ZNF418Q8TF45 676 aaPredicted RBP7.66□□□□□ -1.18
CPNE1-218ENST00000439806 DEFB104AQ8WTQ1 72 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 TIMM17AQ99595 171 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 LINC00467Q9BRT7 94 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 TTTY13Q9BZ97 58 aa7.66□□□□□ -1.18
CPNE1-218ENST00000439806 TSSC4Q9Y5U2 329 aaPredicted RBP7.66□□□□□ -1.18
CPNE1-218ENST00000439806 TRBV25-1A0A075B6N4 114 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 I3L3M4 83 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 FHL3Q13643 280 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 STHQ8IWL8 128 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 OR4C5Q8NGB2 326 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 CLUHP3Q96NS8 147 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 C16orf95Q9H693 158 aa7.65□□□□□ -1.18
CPNE1-218ENST00000439806 C9orf118A6NHY6 69 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 IGIPA6NJ69 53 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 CCL25O15444 150 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 CMC4P56277 68 aaPredicted RBP7.64□□□□□ -1.19
CPNE1-218ENST00000439806 RPL39P62891 51 aaKnown RBP7.64□□□□□ -1.19
CPNE1-218ENST00000439806 TAL2Q16559 108 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 PIK3CD-AS1Q5SR53 167 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 MAPKAPK5-AS1Q8N8E1 139 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 PTH2Q96A98 100 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 CITED2Q99967 270 aaPredicted RBP7.64□□□□□ -1.19
CPNE1-218ENST00000439806 SPXQ9BT56 116 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 EDA2RQ9HAV5 297 aa7.64□□□□□ -1.19
CPNE1-218ENST00000439806 CFAP46Q8IYW2 2715 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 IGHV3-73A0A0B4J1V6 119 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 MYMXA0A1B0GTQ4 84 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 E9PLD3 99 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 K7EP13 123 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 RHODO00212 210 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 TSHBP01222 138 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 SMIM13P0DJ93 91 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 ODF3L2Q3SX64 289 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 LINC01006Q8NI28 216 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 PRADC1Q9BSG0 188 aa7.63□□□□□ -1.19
CPNE1-218ENST00000439806 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms