RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
SMAD3-202ENST00000439724 JPT2Q9H910 190 aa8.64□□□□□ -1.03
SMAD3-202ENST00000439724 GCN1Q92616 2671 aaKnown RBP8.64□□□□□ -1.03
SMAD3-202ENST00000439724 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
SMAD3-202ENST00000439724 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
SMAD3-202ENST00000439724 INAFM1C9JVW0 142 aa8.64□□□□□ -1.03
SMAD3-202ENST00000439724 INSP01308 110 aa8.64□□□□□ -1.03
SMAD3-202ENST00000439724 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
SMAD3-202ENST00000439724 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-202ENST00000439724 MCRIP2Q9BUT9 160 aaKnown RBP8.64□□□□□ -1.03
SMAD3-202ENST00000439724 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
SMAD3-202ENST00000439724 A0A087WWL8 130 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 hDV102S1A0JD36 115 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 TCAPO15273 167 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 SAP30O75446 220 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 ATP5LO75964 103 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 CRYGDP07320 174 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 NSUN5P1Q3KNT7 163 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
SMAD3-202ENST00000439724 PTH2Q96A98 100 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
SMAD3-202ENST00000439724 AKAP9Q99996 3911 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 KRTAP10-3P60369 221 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 ZNF415Q09FC8 603 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 C2orf88Q9BSF0 95 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 GOLT1BQ9Y3E0 138 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 MTORP42345 2549 aa8.62□□□□□ -1.03
SMAD3-202ENST00000439724 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 M0R143 59 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 EREGO14944 169 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 Q6ZN92 141 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 STHQ8IWL8 128 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 C18orf15Q96N68 181 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 SNHG12Q9BXW3 62 aa8.61□□□□□ -1.03
SMAD3-202ENST00000439724 F5H697 171 aa8.6□□□□□ -1.03
SMAD3-202ENST00000439724 NUDT3O95989 172 aa8.6□□□□□ -1.03
SMAD3-202ENST00000439724 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
SMAD3-202ENST00000439724 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
SMAD3-202ENST00000439724 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
SMAD3-202ENST00000439724 FAM74A4Q5TZK3 123 aa8.6□□□□□ -1.03
SMAD3-202ENST00000439724 CSTL1Q9H114 145 aa8.6□□□□□ -1.03
SMAD3-202ENST00000439724 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
SMAD3-202ENST00000439724 M0QY20 66 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 M0R2P5 195 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 ODF1Q14990 250 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 ZNF56Q15929 161 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 LINC01587Q99440 93 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 WNK1Q9H4A3 2382 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 CRLF1O75462 422 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 NUTF2P61970 127 aaKnown RBP8.59□□□□□ -1.03
SMAD3-202ENST00000439724 LINC00482Q8N8I6 264 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 SPXQ9BT56 116 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
SMAD3-202ENST00000439724 MRPS16Q9Y3D3 137 aaKnown RBP8.59□□□□□ -1.03
SMAD3-202ENST00000439724 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 A8MWV9 139 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 VCYO14598 125 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 PRSS1P07477 247 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 HTN1P15515 57 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 G0S2P27469 103 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 MORN3Q6PF18 240 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-202ENST00000439724 C19orf73Q9NVV2 129 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 XCL2Q9UBD3 114 aa8.58□□□□□ -1.04
SMAD3-202ENST00000439724 SDHAF1A6NFY7 115 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 PF4P02776 101 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 UFSP1Q6NVU6 142 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 SLC25A34Q6PIV7 304 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 C2orf66Q6UXQ4 117 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
SMAD3-202ENST00000439724 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
SMAD3-202ENST00000439724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-202ENST00000439724 H7C1H1 209 aa8.56□□□□□ -1.04
SMAD3-202ENST00000439724 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
SMAD3-202ENST00000439724 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
SMAD3-202ENST00000439724 A0A087WX48 190 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 PRM2P04554 102 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 COX8AP10176 69 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 RIPPLY3P57055 190 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 ZFP2Q6ZN57 461 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 TMEM208Q9BTX3 173 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 CYSLTR1Q9Y271 337 aa8.55□□□□□ -1.04
SMAD3-202ENST00000439724 RHODO00212 210 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 DPM2O94777 84 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 IGKCP01834 107 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 RHOHQ15669 191 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 ERASQ7Z444 233 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms