RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.54
TSC2-206ENST00000439117 TM2D2Q9BX73 214 aa11.65□□□□□ -0.54
TSC2-206ENST00000439117 ATRXP46100 2492 aa11.65□□□□□ -0.55
TSC2-206ENST00000439117 C11orf86A6NJI1 115 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 NKAPP1Q8N9T2 125 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 TOMM6Q96B49 74 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 GNRH2O43555 120 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 EML6Q6ZMW3 1958 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 PCDH15Q96QU1 1955 aa11.64□□□□□ -0.55
TSC2-206ENST00000439117 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
TSC2-206ENST00000439117 H3BQ85 93 aa11.63□□□□□ -0.55
TSC2-206ENST00000439117 HOXB4P17483 251 aaPredicted RBP11.63□□□□□ -0.55
TSC2-206ENST00000439117 Q8N1Y9 231 aa11.63□□□□□ -0.55
TSC2-206ENST00000439117 IGKV1-17P01599 117 aa11.63□□□□□ -0.55
TSC2-206ENST00000439117 DEFB113Q30KQ7 82 aa11.63□□□□□ -0.55
TSC2-206ENST00000439117 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
TSC2-206ENST00000439117 TCL1BO95988 128 aa11.62□□□□□ -0.55
TSC2-206ENST00000439117 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
TSC2-206ENST00000439117 FBXL19-AS1Q494R0 122 aa11.62□□□□□ -0.55
TSC2-206ENST00000439117 IGF2RP11717 2491 aa11.61□□□□□ -0.55
TSC2-206ENST00000439117 ELANEP08246 267 aa11.61□□□□□ -0.55
TSC2-206ENST00000439117 TNRC6AQ8NDV7 1962 aaKnown RBP11.61□□□□□ -0.55
TSC2-206ENST00000439117 BRK1Q8WUW1 75 aa11.61□□□□□ -0.55
TSC2-206ENST00000439117 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
TSC2-206ENST00000439117 IGHV4-30-2A0A087WSY4 118 aa11.61□□□□□ -0.55
TSC2-206ENST00000439117 DEFB112Q30KQ8 113 aa11.61□□□□□ -0.55
TSC2-206ENST00000439117 SRCAPQ6ZRS2 3230 aa11.61□□□□□ -0.55
TSC2-206ENST00000439117 I3L2K1 104 aa11.6□□□□□ -0.55
TSC2-206ENST00000439117 COL4A4P53420 1690 aaPredicted RBP11.6□□□□□ -0.55
TSC2-206ENST00000439117 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
TSC2-206ENST00000439117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.59□□□□□ -0.55
TSC2-206ENST00000439117 IGKV2-29A2NJV5 120 aaPredicted RBP11.59□□□□□ -0.55
TSC2-206ENST00000439117 FUSP35637 526 aaKnown RBP eCLIP11.59□□□□□ -0.55
TSC2-206ENST00000439117 IGHV4-59P01825 116 aa11.59□□□□□ -0.55
TSC2-206ENST00000439117 CLEC2BQ92478 149 aa11.59□□□□□ -0.55
TSC2-206ENST00000439117 VPREB3Q9UKI3 123 aa11.59□□□□□ -0.55
TSC2-206ENST00000439117 C10orf105Q8TEF2 133 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 CENPVL3A0A0U1RRI6 287 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 K7EIM0 57 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 NCOA6Q14686 2063 aaPredicted RBP11.58□□□□□ -0.56
TSC2-206ENST00000439117 SONP18583 2426 aaKnown RBP11.58□□□□□ -0.56
TSC2-206ENST00000439117 IGKV1OR2-108A0A075B7D4 117 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 H3BUA1 57 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 MED14OSP0DP75 135 aa11.58□□□□□ -0.56
TSC2-206ENST00000439117 TRAV4A0A0B4J268 109 aa11.57□□□□□ -0.56
TSC2-206ENST00000439117 MP68P56378 58 aa11.57□□□□□ -0.56
TSC2-206ENST00000439117 HIVEP2P31629 2446 aa11.57□□□□□ -0.56
TSC2-206ENST00000439117 C3orf22Q8N5N4 141 aa11.57□□□□□ -0.56
TSC2-206ENST00000439117 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
TSC2-206ENST00000439117 TMEM131Q92545 1883 aa11.56□□□□□ -0.56
TSC2-206ENST00000439117 IGLV2-8P01709 118 aa11.56□□□□□ -0.56
TSC2-206ENST00000439117 CFHR3Q02985 330 aa11.56□□□□□ -0.56
TSC2-206ENST00000439117 WFDC9Q8NEX5 89 aa11.56□□□□□ -0.56
TSC2-206ENST00000439117 ZNF503Q96F45 646 aa11.56□□□□□ -0.56
TSC2-206ENST00000439117 TP53TG3Q9ULZ0 132 aa11.55□□□□□ -0.56
TSC2-206ENST00000439117 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
TSC2-206ENST00000439117 LECT2O14960 151 aa11.55□□□□□ -0.56
TSC2-206ENST00000439117 RPL39P62891 51 aaKnown RBP11.55□□□□□ -0.56
TSC2-206ENST00000439117 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
TSC2-206ENST00000439117 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
TSC2-206ENST00000439117 PDE6GP18545 87 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
TSC2-206ENST00000439117 NREPQ16612 68 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 IGLC6P0CF74 106 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 IGHV1-58A0A0C4DH39 117 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 NRGNQ92686 78 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 MBD6Q96DN6 1003 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 PRORYQ9H606 182 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 BUB3O43684 328 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 GDF5OSQ5U4N7 250 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 VSIG2Q96IQ7 327 aa11.54□□□□□ -0.56
TSC2-206ENST00000439117 IGLV2-14P01704 120 aa11.53□□□□□ -0.56
TSC2-206ENST00000439117 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
TSC2-206ENST00000439117 ALPK3Q96L96 1907 aa11.53□□□□□ -0.56
TSC2-206ENST00000439117 SPRY2O43597 315 aa11.53□□□□□ -0.56
TSC2-206ENST00000439117 ANGP03950 147 aaKnown RBP11.52□□□□□ -0.56
TSC2-206ENST00000439117 PLA2G5P39877 138 aa11.52□□□□□ -0.56
TSC2-206ENST00000439117 C9orf47Q6ZRZ4 202 aa11.52□□□□□ -0.56
TSC2-206ENST00000439117 FAM236DA0A1B0GTK5 79 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 C10orf142B7Z368 130 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 P0C879 139 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 FAM236CP0DP71 79 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 IMUPQ9GZP8 106 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 CCDC168Q8NDH2 2452 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 ODF3L1Q8IXM7 274 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 NPBQ8NG41 125 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 PRR14LQ5THK1 2151 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 TMEM256-PLSCR3K7ERE1 68 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 CTSGP08311 255 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 XCL1P47992 114 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 DAD1P61803 113 aa11.52□□□□□ -0.57
TSC2-206ENST00000439117 C16orf54Q6UWD8 224 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms