RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 HSBP1L1C9JCN9 74 aa18.96■□□□□ 0.63
CPNE1-216ENST00000437340 MGPP08493 103 aa18.96■□□□□ 0.63
CPNE1-216ENST00000437340 SUMO2P61956 95 aaKnown RBP18.96■□□□□ 0.63
CPNE1-216ENST00000437340 MDFICQ9P1T7 246 aa18.96■□□□□ 0.63
CPNE1-216ENST00000437340 K7EMI3 77 aa18.95■□□□□ 0.62
CPNE1-216ENST00000437340 M0R143 59 aa18.95■□□□□ 0.62
CPNE1-216ENST00000437340 CLUHP3Q96NS8 147 aa18.95■□□□□ 0.62
CPNE1-216ENST00000437340 C2orf88Q9BSF0 95 aa18.94■□□□□ 0.62
CPNE1-216ENST00000437340 TMEM158Q8WZ71 300 aa18.93■□□□□ 0.62
CPNE1-216ENST00000437340 RBMY1BA6NDE4 496 aaKnown RBP18.93■□□□□ 0.62
CPNE1-216ENST00000437340 RBMY1EA6NEQ0 496 aaKnown RBP18.93■□□□□ 0.62
CPNE1-216ENST00000437340 RBMY1DP0C7P1 496 aaKnown RBP18.93■□□□□ 0.62
CPNE1-216ENST00000437340 PROK1P58294 105 aa18.93■□□□□ 0.62
CPNE1-216ENST00000437340 MCRIP2Q9BUT9 160 aaKnown RBP18.93■□□□□ 0.62
CPNE1-216ENST00000437340 SNHG12Q9BXW3 62 aa18.92■□□□□ 0.62
CPNE1-216ENST00000437340 ZNF124Q15973 351 aa18.91■□□□□ 0.62
CPNE1-216ENST00000437340 RBMY1A1P0DJD3 496 aaKnown RBP18.91■□□□□ 0.62
CPNE1-216ENST00000437340 RBMY1CP0DJD4 496 aa18.91■□□□□ 0.62
CPNE1-216ENST00000437340 RBMY1FQ15415 496 aaKnown RBP18.91■□□□□ 0.62
CPNE1-216ENST00000437340 ORMDL2Q53FV1 153 aa18.91■□□□□ 0.62
CPNE1-216ENST00000437340 Q6ZN92 141 aa18.91■□□□□ 0.62
CPNE1-216ENST00000437340 RPL39LQ96EH5 51 aaKnown RBP18.91■□□□□ 0.62
CPNE1-216ENST00000437340 GOLT1BQ9Y3E0 138 aa18.91■□□□□ 0.62
CPNE1-216ENST00000437340 hDV102S1A0JD36 115 aa18.9■□□□□ 0.62
CPNE1-216ENST00000437340 CBY3A6NI87 242 aa18.9■□□□□ 0.62
CPNE1-216ENST00000437340 RPL32P62910 135 aaKnown RBP18.9■□□□□ 0.62
CPNE1-216ENST00000437340 PMCHL2Q9BQD1 86 aa18.9■□□□□ 0.62
CPNE1-216ENST00000437340 EREGO14944 169 aa18.89■□□□□ 0.61
CPNE1-216ENST00000437340 TCAPO15273 167 aa18.89■□□□□ 0.61
CPNE1-216ENST00000437340 ATP5LO75964 103 aa18.88■□□□□ 0.61
CPNE1-216ENST00000437340 ODF3L2Q3SX64 289 aa18.88■□□□□ 0.61
CPNE1-216ENST00000437340 JPT2Q9H910 190 aa18.88■□□□□ 0.61
CPNE1-216ENST00000437340 SETD2Q9BYW2 2564 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-216ENST00000437340 HNRNPA3P51991 378 aaKnown RBP18.88■□□□□ 0.61
CPNE1-216ENST00000437340 LINC00467Q9BRT7 94 aa18.88■□□□□ 0.61
CPNE1-216ENST00000437340 C2CD3Q4AC94 2353 aa18.87■□□□□ 0.61
CPNE1-216ENST00000437340 C18orf15Q96N68 181 aa18.87■□□□□ 0.61
CPNE1-216ENST00000437340 ADARB2-AS1A8MUL3 147 aa18.86■□□□□ 0.61
CPNE1-216ENST00000437340 SUMO4Q6EEV6 95 aa18.86■□□□□ 0.61
CPNE1-216ENST00000437340 A0A087WWL8 130 aa18.86■□□□□ 0.61
CPNE1-216ENST00000437340 NUDT3O95989 172 aa18.86■□□□□ 0.61
CPNE1-216ENST00000437340 CMC4P56277 68 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-216ENST00000437340 MRPS16Q9Y3D3 137 aaKnown RBP18.86■□□□□ 0.61
CPNE1-216ENST00000437340 TEP1Q99973 2627 aaKnown RBP18.85■□□□□ 0.61
CPNE1-216ENST00000437340 OR11H12B2RN74 326 aa18.84■□□□□ 0.61
CPNE1-216ENST00000437340 CRYGDP07320 174 aa18.84■□□□□ 0.61
CPNE1-216ENST00000437340 ZNF876PQ49A33 203 aa18.84■□□□□ 0.61
CPNE1-216ENST00000437340 INSP01308 110 aa18.83■□□□□ 0.61
CPNE1-216ENST00000437340 NIPBLQ6KC79 2804 aaeCLIP18.83■□□□□ 0.611e-8■□□□□ 10.5
CPNE1-216ENST00000437340 TRBV6-5A0A0K0K1A5 114 aa18.83■□□□□ 0.6
CPNE1-216ENST00000437340 F5H697 171 aa18.83■□□□□ 0.6
CPNE1-216ENST00000437340 PIK3CD-AS1Q5SR53 167 aa18.83■□□□□ 0.6
CPNE1-216ENST00000437340 SAP30O75446 220 aa18.82■□□□□ 0.6
CPNE1-216ENST00000437340 PRSS1P07477 247 aa18.82■□□□□ 0.6
CPNE1-216ENST00000437340 STHQ8IWL8 128 aa18.82■□□□□ 0.6
CPNE1-216ENST00000437340 PTH2Q96A98 100 aa18.82■□□□□ 0.6
CPNE1-216ENST00000437340 CSTL1Q9H114 145 aa18.82■□□□□ 0.6
CPNE1-216ENST00000437340 POLR2KP53803 58 aaKnown RBP18.81■□□□□ 0.6
CPNE1-216ENST00000437340 ODF1Q14990 250 aa18.81■□□□□ 0.6
CPNE1-216ENST00000437340 SLC25A34Q6PIV7 304 aa18.81■□□□□ 0.6
CPNE1-216ENST00000437340 TOMM6Q96B49 74 aa18.81■□□□□ 0.6
CPNE1-216ENST00000437340 FAM74A4Q5TZK3 123 aa18.81■□□□□ 0.6
CPNE1-216ENST00000437340 MAST4O15021 2626 aa18.8■□□□□ 0.6
CPNE1-216ENST00000437340 IGLV1-51P01701 117 aa18.8■□□□□ 0.6
CPNE1-216ENST00000437340 ZNF415Q09FC8 603 aa18.8■□□□□ 0.6
CPNE1-216ENST00000437340 NDUFA11Q86Y39 141 aa18.8■□□□□ 0.6
CPNE1-216ENST00000437340 FAM110AQ9BQ89 295 aa18.8■□□□□ 0.6
CPNE1-216ENST00000437340 ZMAT4Q9H898 229 aa18.8■□□□□ 0.6
CPNE1-216ENST00000437340 G0S2P27469 103 aa18.79■□□□□ 0.6
CPNE1-216ENST00000437340 ZNF56Q15929 161 aa18.79■□□□□ 0.6
CPNE1-216ENST00000437340 NSUN5P1Q3KNT7 163 aa18.79■□□□□ 0.6
CPNE1-216ENST00000437340 TRPT1Q86TN4 253 aaKnown RBP18.79■□□□□ 0.6
CPNE1-216ENST00000437340 VCYO14598 125 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 HTN1P15515 57 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 LINC01587Q99440 93 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 DKK2Q9UBU2 259 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 WNK1Q9H4A3 2382 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 LINC01549A6NIU2 74 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-216ENST00000437340 M0QY20 66 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 M0R2P5 195 aa18.78■□□□□ 0.6
CPNE1-216ENST00000437340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-216ENST00000437340 KRTAP10-3P60369 221 aa18.77■□□□□ 0.6
CPNE1-216ENST00000437340 LURAP1LQ8IV03 231 aa18.77■□□□□ 0.6
CPNE1-216ENST00000437340 COX8AP10176 69 aa18.76■□□□□ 0.59
CPNE1-216ENST00000437340 NUTF2P61970 127 aaKnown RBP18.76■□□□□ 0.59
CPNE1-216ENST00000437340 EDA2RQ9HAV5 297 aa18.76■□□□□ 0.59
CPNE1-216ENST00000437340 JMJD1CQ15652 2540 aa18.76■□□□□ 0.59
CPNE1-216ENST00000437340 TRBV27A0A0K0K1C4 114 aa18.76■□□□□ 0.59
CPNE1-216ENST00000437340 KIR2DL4Q99706 377 aa18.76■□□□□ 0.59
CPNE1-216ENST00000437340 SDHAF1A6NFY7 115 aa18.75■□□□□ 0.59
CPNE1-216ENST00000437340 A8MWV9 139 aa18.75■□□□□ 0.59
CPNE1-216ENST00000437340 C2orf66Q6UXQ4 117 aa18.75■□□□□ 0.59
CPNE1-216ENST00000437340 SCGB3A1Q96QR1 104 aa18.75■□□□□ 0.59
CPNE1-216ENST00000437340 SPXQ9BT56 116 aa18.75■□□□□ 0.59
CPNE1-216ENST00000437340 TRAV12-1A0A0B4J245 112 aa18.74■□□□□ 0.59
CPNE1-216ENST00000437340 A0A1B0GV90 55 aa18.74■□□□□ 0.59
CPNE1-216ENST00000437340 ANKRD39Q53RE8 183 aa18.73■□□□□ 0.59
CPNE1-216ENST00000437340 C11orf72Q8NBR9 251 aa18.73■□□□□ 0.59
CPNE1-216ENST00000437340 DPM2O94777 84 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms