RNA–Protein interactions for RNA: ENST00000436881.2

C9orf172-201, Transcript of Uncharacterized protein C9orf172, humanhuman

APPRIS P1 BASIC

Gene C9orf172, Length 4,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172-201ENST00000436881 C3orf56Q8N813 242 aa12.39□□□□□ -0.43
C9orf172-201ENST00000436881 TSPAN13O95857 204 aa12.39□□□□□ -0.43
C9orf172-201ENST00000436881 CFHR3Q02985 330 aa12.39□□□□□ -0.43
C9orf172-201ENST00000436881 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
C9orf172-201ENST00000436881 SCRT2Q9NQ03 307 aa12.39□□□□□ -0.43
C9orf172-201ENST00000436881 RHOHQ15669 191 aa12.38□□□□□ -0.43
C9orf172-201ENST00000436881 MBD6Q96DN6 1003 aa12.38□□□□□ -0.43
C9orf172-201ENST00000436881 PRRC2AP48634 2157 aaKnown RBP12.38□□□□□ -0.43
C9orf172-201ENST00000436881 SIVA1O15304 175 aa12.38□□□□□ -0.43
C9orf172-201ENST00000436881 SLURP1P55000 103 aa12.38□□□□□ -0.43
C9orf172-201ENST00000436881 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
C9orf172-201ENST00000436881 CRYGBP07316 175 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 IGHV3-38A0A0C4DH36 116 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 A6NDX4 124 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 ZNF843Q8N446 348 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 A0A1B0GXF2 115 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 COL4A2P08572 1712 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 PRRC2CQ9Y520 2896 aaKnown RBP12.37□□□□□ -0.43
C9orf172-201ENST00000436881 A0A1B0GV72 72 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 SPRY2O43597 315 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 LINC01545Q5VT33 79 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 Q8N976 141 aa12.37□□□□□ -0.43
C9orf172-201ENST00000436881 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
C9orf172-201ENST00000436881 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 EBI3Q14213 229 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 TAL2Q16559 108 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 SIGMAR1Q99720 223 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
C9orf172-201ENST00000436881 C11orf68Q9H3H3 251 aaKnown RBP12.36□□□□□ -0.43
C9orf172-201ENST00000436881 LEPROTO15243 131 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 DAD1P61803 113 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 ZNF625Q96I27 306 aaPredicted RBP12.35□□□□□ -0.43
C9orf172-201ENST00000436881 LY6LH3BQJ8 138 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 JPT2Q9H910 190 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 PRUNE2Q8WUY3 3088 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 K7EP34 96 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
C9orf172-201ENST00000436881 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 A0A087WW49 117 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 J3QQQ9 107 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 UNQ9165/PRO28630Q6UXU0 137 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 PCP2Q8IVA1 136 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 MLST8Q9BVC4 326 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 C11orf71Q6IPW1 123 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 U3KQE9 123 aa12.34□□□□□ -0.43
C9orf172-201ENST00000436881 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
C9orf172-201ENST00000436881 F5H768 121 aa12.33□□□□□ -0.44
C9orf172-201ENST00000436881 APOC4P55056 127 aa12.33□□□□□ -0.44
C9orf172-201ENST00000436881 ARHGAP32A7KAX9 2087 aa12.33□□□□□ -0.44
C9orf172-201ENST00000436881 HIST2H2BCQ6DN03 193 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 RPL39LQ96EH5 51 aaKnown RBP12.32□□□□□ -0.44
C9orf172-201ENST00000436881 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 ADAMTSL5Q6ZMM2 481 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 LINC01548A6NM66 108 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 MED14OSP0DP75 135 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 RBX1P62877 108 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 LOXL1Q08397 574 aaPredicted RBP12.32□□□□□ -0.44
C9orf172-201ENST00000436881 TRBV20-1A0A075B6N2 111 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
C9orf172-201ENST00000436881 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 ACANP16112 2415 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 IGF1P05019 195 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 GATD1Q8NB37 220 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 TRBV12-3P01733 135 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 FN1P02751 2386 aaKnown RBP12.31□□□□□ -0.44
C9orf172-201ENST00000436881 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
C9orf172-201ENST00000436881 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 VWC2LB2RUY7 222 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 DEFB121Q5J5C9 76 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 K7ERJ3 54 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 CEND1Q8N111 149 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 HERVK_113P63121 156 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 GAGE6Q13070 117 aa12.3□□□□□ -0.44
C9orf172-201ENST00000436881 C9JAW5 83 aa12.29□□□□□ -0.44
C9orf172-201ENST00000436881 NOP10Q9NPE3 64 aaKnown RBP12.29□□□□□ -0.44
C9orf172-201ENST00000436881 IGHG4P01861 327 aa12.29□□□□□ -0.44
C9orf172-201ENST00000436881 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
C9orf172-201ENST00000436881 Q8N1Y9 231 aa12.29□□□□□ -0.44
C9orf172-201ENST00000436881 DEFB1P60022 68 aa12.28□□□□□ -0.44
C9orf172-201ENST00000436881 OVOL2Q9BRP0 275 aa12.28□□□□□ -0.44
C9orf172-201ENST00000436881 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
C9orf172-201ENST00000436881 CDH23Q9H251 3354 aa12.27□□□□□ -0.44
C9orf172-201ENST00000436881 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.44
C9orf172-201ENST00000436881 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.44
C9orf172-201ENST00000436881 TRAV25A0A0B4J276 109 aa12.27□□□□□ -0.45
C9orf172-201ENST00000436881 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
C9orf172-201ENST00000436881 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
C9orf172-201ENST00000436881 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
C9orf172-201ENST00000436881 A0A0J9YX75 114 aa12.26□□□□□ -0.45
C9orf172-201ENST00000436881 TTTY13Q9BZ97 58 aa12.26□□□□□ -0.45
C9orf172-201ENST00000436881 ETDBQ3ZM63 59 aa12.26□□□□□ -0.45
C9orf172-201ENST00000436881 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
C9orf172-201ENST00000436881 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
C9orf172-201ENST00000436881 TMEM61Q8N0U2 210 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms