RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 PSCAO43653 123 aa17.32■□□□□ 0.36
TOP2B-204ENST00000435706 UBE2DNLQ8IWF7 75 aa17.32■□□□□ 0.36
TOP2B-204ENST00000435706 COL6A6A6NMZ7 2263 aa17.32■□□□□ 0.36
TOP2B-204ENST00000435706 NDUFV3P56181 108 aaKnown RBP17.31■□□□□ 0.36
TOP2B-204ENST00000435706 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
TOP2B-204ENST00000435706 MAPK1IP1LQ8NDC0 245 aa17.31■□□□□ 0.36
TOP2B-204ENST00000435706 TM2D2Q9BX73 214 aa17.3■□□□□ 0.36
TOP2B-204ENST00000435706 CRYGBP07316 175 aa17.3■□□□□ 0.36
TOP2B-204ENST00000435706 MLST8Q9BVC4 326 aa17.3■□□□□ 0.36
TOP2B-204ENST00000435706 RNF114Q9Y508 228 aa17.3■□□□□ 0.36
TOP2B-204ENST00000435706 MED13Q9UHV7 2174 aa17.29■□□□□ 0.36
TOP2B-204ENST00000435706 Q8N1Y9 231 aa17.29■□□□□ 0.36
TOP2B-204ENST00000435706 PRB1P04280 392 aa17.29■□□□□ 0.36
TOP2B-204ENST00000435706 COX7B2Q8TF08 81 aa17.28■□□□□ 0.36
TOP2B-204ENST00000435706 K7ENP7 123 aa17.28■□□□□ 0.36
TOP2B-204ENST00000435706 AJUBAQ96IF1 538 aa17.28■□□□□ 0.36
TOP2B-204ENST00000435706 LINC00643Q86TS7 51 aa17.27■□□□□ 0.36
TOP2B-204ENST00000435706 IGHV1-58A0A0C4DH39 117 aa17.26■□□□□ 0.35
TOP2B-204ENST00000435706 CACNA1BQ00975 2339 aa17.26■□□□□ 0.35
TOP2B-204ENST00000435706 PROP1O75360 226 aa17.26■□□□□ 0.35
TOP2B-204ENST00000435706 ZNF80P51504 273 aaPredicted RBP17.26■□□□□ 0.35
TOP2B-204ENST00000435706 Q8N9W7 124 aa17.26■□□□□ 0.35
TOP2B-204ENST00000435706 LECT2O14960 151 aa17.26■□□□□ 0.35
TOP2B-204ENST00000435706 ATP5G1P05496 136 aa17.26■□□□□ 0.35
TOP2B-204ENST00000435706 NDUFC2O95298 119 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 IGLV1-47P01700 117 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 TMEM61Q8N0U2 210 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 VSIG2Q96IQ7 327 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 OPRPNQ99935 248 aaPredicted RBP17.25■□□□□ 0.35
TOP2B-204ENST00000435706 K7EQD1 137 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 HIST2H2BCQ6DN03 193 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 DKK4Q9UBT3 224 aa17.25■□□□□ 0.35
TOP2B-204ENST00000435706 IGHV3-30-3P0DP02 117 aa17.24■□□□□ 0.35
TOP2B-204ENST00000435706 NBASA2RRP1 2371 aa17.24■□□□□ 0.35
TOP2B-204ENST00000435706 DAZ2Q13117 558 aaKnown RBP17.24■□□□□ 0.35
TOP2B-204ENST00000435706 DAZ4Q86SG3 579 aaKnown RBP17.24■□□□□ 0.35
TOP2B-204ENST00000435706 DAZ3Q9NR90 486 aaKnown RBP17.24■□□□□ 0.35
TOP2B-204ENST00000435706 RNF152Q8N8N0 203 aa17.23■□□□□ 0.35
TOP2B-204ENST00000435706 JMJD7-PLA2G4BH0Y9G9 81 aa17.23■□□□□ 0.35
TOP2B-204ENST00000435706 C20orf203Q8NBC4 194 aa17.23■□□□□ 0.35
TOP2B-204ENST00000435706 GTF3C1Q12789 2109 aa17.23■□□□□ 0.35
TOP2B-204ENST00000435706 J3QLI3 93 aa17.22■□□□□ 0.35
TOP2B-204ENST00000435706 Q6ZQT7 251 aa17.22■□□□□ 0.35
TOP2B-204ENST00000435706 IGLC6P0CF74 106 aa17.22■□□□□ 0.35
TOP2B-204ENST00000435706 APRG1Q8IVJ8 170 aa17.22■□□□□ 0.35
TOP2B-204ENST00000435706 DEFB105AQ8NG35 78 aa17.21■□□□□ 0.35
TOP2B-204ENST00000435706 TEX49A0A1B0GTD5 131 aa17.21■□□□□ 0.35
TOP2B-204ENST00000435706 DEFB1P60022 68 aa17.21■□□□□ 0.35
TOP2B-204ENST00000435706 NFE4Q86UQ8 179 aa17.21■□□□□ 0.35
TOP2B-204ENST00000435706 IGHV4-4A0A075B6R2 117 aa17.2■□□□□ 0.34
TOP2B-204ENST00000435706 RIF1Q5UIP0 2472 aaKnown RBP17.2■□□□□ 0.34
TOP2B-204ENST00000435706 MIAQ16674 131 aa17.2■□□□□ 0.34
TOP2B-204ENST00000435706 IGKV2D-26A0A0A0MRZ7 120 aa17.2■□□□□ 0.34
TOP2B-204ENST00000435706 PLA2G2CQ5R387 149 aa17.2■□□□□ 0.34
TOP2B-204ENST00000435706 PCNX1Q96RV3 2341 aa17.19■□□□□ 0.34
TOP2B-204ENST00000435706 IGHV4-59P01825 116 aa17.19■□□□□ 0.34
TOP2B-204ENST00000435706 NCKAP5O14513 1909 aa17.19■□□□□ 0.34
TOP2B-204ENST00000435706 EIF4EBP1Q13541 118 aaPredicted RBP17.19■□□□□ 0.34
TOP2B-204ENST00000435706 DYSFO75923 2080 aa17.19■□□□□ 0.34
TOP2B-204ENST00000435706 FANCD2OSQ96PS1 177 aa17.19■□□□□ 0.34
TOP2B-204ENST00000435706 NUP210Q8TEM1 1887 aaPredicted RBP17.18■□□□□ 0.34
TOP2B-204ENST00000435706 DEFB136Q30KP8 78 aa17.18■□□□□ 0.34
TOP2B-204ENST00000435706 A0A0J9YXY3 114 aa17.18■□□□□ 0.34
TOP2B-204ENST00000435706 FUSP35637 526 aaKnown RBP eCLIP17.18■□□□□ 0.34
TOP2B-204ENST00000435706 DEFB112Q30KQ8 113 aa17.18■□□□□ 0.34
TOP2B-204ENST00000435706 IGFL2Q6UWQ7 119 aa17.18■□□□□ 0.34
TOP2B-204ENST00000435706 NEXN-AS1Q8NBZ9 246 aa17.18■□□□□ 0.34
TOP2B-204ENST00000435706 GRNP28799 593 aaKnown RBP17.18■□□□□ 0.34
TOP2B-204ENST00000435706 C5orf56Q8N8D9 126 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 MAPKAPK5-AS1Q8N8E1 139 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 A0A0J9YY99 117 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 C5orf47Q569G3 176 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 Q9HAA7 133 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 APOC4P55056 127 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 MSMPQ1L6U9 139 aa17.17■□□□□ 0.34
TOP2B-204ENST00000435706 C2orf91Q6ZV80 131 aa17.16■□□□□ 0.34
TOP2B-204ENST00000435706 BLCAPP62952 87 aa17.16■□□□□ 0.34
TOP2B-204ENST00000435706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.16■□□□□ 0.341e-12■■■■■ 51.5
TOP2B-204ENST00000435706 TRBV7-3A0A075B6L6 115 aa17.16■□□□□ 0.34
TOP2B-204ENST00000435706 MIR7-3HGQ8N6C7 128 aa17.16■□□□□ 0.34
TOP2B-204ENST00000435706 MED13LQ71F56 2210 aa17.15■□□□□ 0.34
TOP2B-204ENST00000435706 UQCRQO14949 82 aa17.15■□□□□ 0.34
TOP2B-204ENST00000435706 C14orf132Q9NPU4 83 aa17.15■□□□□ 0.34
TOP2B-204ENST00000435706 VPREB3Q9UKI3 123 aa17.15■□□□□ 0.34
TOP2B-204ENST00000435706 WT1P19544 449 aaPredicted RBP17.15■□□□□ 0.34
TOP2B-204ENST00000435706 SLURP1P55000 103 aa17.15■□□□□ 0.34
TOP2B-204ENST00000435706 MDFICQ9P1T7 246 aa17.15■□□□□ 0.34
TOP2B-204ENST00000435706 CGB3P0DN86 165 aa17.14■□□□□ 0.33
TOP2B-204ENST00000435706 CGB7P0DN87 165 aa17.14■□□□□ 0.33
TOP2B-204ENST00000435706 Q8N7P7 452 aa17.14■□□□□ 0.33
TOP2B-204ENST00000435706 ALPK3Q96L96 1907 aa17.14■□□□□ 0.33
TOP2B-204ENST00000435706 COX7A2LO14548 114 aa17.14■□□□□ 0.33
TOP2B-204ENST00000435706 C1orf229Q6ZS94 237 aaPredicted RBP17.13■□□□□ 0.33
TOP2B-204ENST00000435706 NREPQ16612 68 aa17.13■□□□□ 0.33
TOP2B-204ENST00000435706 H3BQ85 93 aa17.13■□□□□ 0.33
TOP2B-204ENST00000435706 ABCA4P78363 2273 aa17.13■□□□□ 0.33
TOP2B-204ENST00000435706 C16orf74Q96GX8 76 aa17.12■□□□□ 0.33
TOP2B-204ENST00000435706 K7EMT4 169 aa17.12■□□□□ 0.33
TOP2B-204ENST00000435706 IGLV10-54A0A075B6I4 117 aa17.12■□□□□ 0.33
TOP2B-204ENST00000435706 CEMP1Q6PRD7 247 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms