RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TMEM97Q5BJF2 176 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 TMEM61Q8N0U2 210 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 KNCNA6PVL3 124 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 TCTAP57738 103 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 TMEM160Q9NX00 188 aa12.36□□□□□ -0.43
LIMK1-203ENST00000435201 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-203ENST00000435201 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 H3BMM0 161 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 H7C1H1 209 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 POLR2KP53803 58 aaKnown RBP12.35□□□□□ -0.43
LIMK1-203ENST00000435201 SEC11AP67812 179 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 ZC2HC1BQ5TFG8 222 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 HIST2H2BCQ6DN03 193 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 PCP2Q8IVA1 136 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 AGRNO00468 2067 aa12.35□□□□□ -0.43
LIMK1-203ENST00000435201 F8VRH5 84 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 VCYO14598 125 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 NPSP0C0P6 89 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 HSD52Q0P140 79 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 AKAP9Q99996 3911 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 CBY3A6NI87 242 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 DEFB114Q30KQ6 69 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 ERASQ7Z444 233 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 KIR2DL4Q99706 377 aa12.34□□□□□ -0.43
LIMK1-203ENST00000435201 TENM4Q6N022 2769 aa12.33□□□□□ -0.44
LIMK1-203ENST00000435201 ZNF56Q15929 161 aa12.33□□□□□ -0.44
LIMK1-203ENST00000435201 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
LIMK1-203ENST00000435201 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
LIMK1-203ENST00000435201 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
LIMK1-203ENST00000435201 MYO9AB2RTY4 2548 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 IGKV2D-26A0A0A0MRZ7 120 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 CRYGDP07320 174 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 KRTAP1-1Q07627 177 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 GTSCR1Q86UQ5 136 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-203ENST00000435201 ESM1Q9NQ30 184 aa12.32□□□□□ -0.44
LIMK1-203ENST00000435201 ZNF256Q9Y2P7 627 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-203ENST00000435201 SDHAF1A6NFY7 115 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
LIMK1-203ENST00000435201 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
LIMK1-203ENST00000435201 ZNF876PQ49A33 203 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 Q6ZVH6 145 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 TRAV25A0A0B4J276 109 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 M0QY20 66 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 SCGB2A2Q13296 93 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 FHL3Q13643 280 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 ZFP2Q6ZN57 461 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 TRPT1Q86TN4 253 aaKnown RBP12.31□□□□□ -0.44
LIMK1-203ENST00000435201 RAX2Q96IS3 184 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 JMJD8Q96S16 334 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 YAE1D1Q9NRH1 226 aa12.31□□□□□ -0.44
LIMK1-203ENST00000435201 RBMY1BA6NDE4 496 aaKnown RBP12.3□□□□□ -0.44
LIMK1-203ENST00000435201 RBMY1EA6NEQ0 496 aaKnown RBP12.3□□□□□ -0.44
LIMK1-203ENST00000435201 RBMY1DP0C7P1 496 aaKnown RBP12.3□□□□□ -0.44
LIMK1-203ENST00000435201 CD300EQ496F6 205 aaPredicted RBP12.3□□□□□ -0.44
LIMK1-203ENST00000435201 A6NDN8 102 aa12.29□□□□□ -0.44
LIMK1-203ENST00000435201 RIPPLY3P57055 190 aa12.29□□□□□ -0.44
LIMK1-203ENST00000435201 FLNAP21333 2647 aaKnown RBP12.29□□□□□ -0.44
LIMK1-203ENST00000435201 TLN2Q9Y4G6 2542 aa12.29□□□□□ -0.44
LIMK1-203ENST00000435201 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
LIMK1-203ENST00000435201 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
LIMK1-203ENST00000435201 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
LIMK1-203ENST00000435201 ZNF124Q15973 351 aa12.28□□□□□ -0.44
LIMK1-203ENST00000435201 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
LIMK1-203ENST00000435201 CLUHP3Q96NS8 147 aa12.28□□□□□ -0.44
LIMK1-203ENST00000435201 LINC00467Q9BRT7 94 aa12.28□□□□□ -0.44
LIMK1-203ENST00000435201 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.44
LIMK1-203ENST00000435201 MORN3Q6PF18 240 aaPredicted RBP12.27□□□□□ -0.44
LIMK1-203ENST00000435201 C16orf95Q9H693 158 aa12.27□□□□□ -0.44
LIMK1-203ENST00000435201 EDA2RQ9HAV5 297 aa12.27□□□□□ -0.44
LIMK1-203ENST00000435201 SORL1Q92673 2214 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 CCL24O00175 119 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 CD28P10747 220 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 ZNF415Q09FC8 603 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 RHOHQ15669 191 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 TIMM17AQ99595 171 aa12.27□□□□□ -0.45
LIMK1-203ENST00000435201 CHD6Q8TD26 2715 aa12.26□□□□□ -0.45
LIMK1-203ENST00000435201 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
LIMK1-203ENST00000435201 PTTG1IPP53801 180 aa12.26□□□□□ -0.45
LIMK1-203ENST00000435201 HIST2H2BDQ6DRA6 164 aa12.26□□□□□ -0.45
LIMK1-203ENST00000435201 PTH2Q96A98 100 aa12.26□□□□□ -0.45
LIMK1-203ENST00000435201 TSSC4Q9Y5U2 329 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-203ENST00000435201 INSP01308 110 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 HTN1P15515 57 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 VAMP3Q15836 100 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 NSUN5P1Q3KNT7 163 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 KMT2BQ9UMN6 2715 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-203ENST00000435201 PDZD2O15018 2839 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms