RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 ZNF876PQ49A33 203 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 TCTEX1D4Q5JR98 221 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 EXOC3-AS1Q8N2X6 119 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 A8MTW9 85 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 JMJD7-PLA2G4BH0Y9G9 81 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 STPG4Q8N801 248 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 C9orf85Q96MD7 179 aa2.89□□□□□ -1.95
SHPRH-205ENST00000433355 CCL24O00175 119 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 RITA1Q96K30 269 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV6-4A0A1B0GX49 114 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV7-3A0A075B6L6 115 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 B5MCH6 92 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 K7EQG2 157 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 WISP1O95388 367 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 PSMB8P28062 276 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 ATP5EP56381 51 aaPredicted RBP2.88□□□□□ -1.95
SHPRH-205ENST00000433355 GNG5P63218 68 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 TRAV8-4A0A0B4J246 113 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 TRAV8-6A0A0B4J262 113 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 NPYP01303 97 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV4-59P01825 116 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 RNASE1P07998 156 aaKnown RBP2.88□□□□□ -1.95
SHPRH-205ENST00000433355 CD300EQ496F6 205 aaPredicted RBP2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MPV17L2Q567V2 206 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 PIP4P2Q8N4L2 257 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 ZFAND2AQ8N6M9 145 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 NEXN-AS1Q8NBZ9 246 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MRPS12O15235 138 aaKnown RBP2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MUC21A0A0G2JKD1 596 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MUC21A0A140T8X8 626 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 IBA57-AS1B1ANH7 110 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MEIG1Q5JSS6 88 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MUC21Q5SSG8 566 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 GNLYP22749 145 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 C14orf177Q52M58 125 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 KHDC1LQ5JSQ8 128 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 C10orf55Q5SWW7 151 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 RNF144BQ7Z419 303 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV3-64DA0A0J9YX35 117 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 BEAN1Q3B7T3 259 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 MAJINQ3KP22 176 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 PRO1933Q9H354 126 aa2.88□□□□□ -1.95
SHPRH-205ENST00000433355 PLA2G5P39877 138 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 SS18Q15532 418 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 GFI1BQ5VTD9 330 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 TMEM170BQ5T4T1 132 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 VSIG2Q96IQ7 327 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 TRAV8-1A0A0A6YYK1 113 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV3-7P01780 117 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 TP53TG1Q9Y2A0 90 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 DYNAPQ8N1N2 210 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 LEAP2Q969E1 77 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 PSMB2P49721 201 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 FAM19A3Q7Z5A8 133 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 SIGMAR1Q99720 223 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 CSTL1Q9H114 145 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 H3BNG1 76 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 Q6Q795 121 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 MGPP08493 103 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 A0A1B0GUV1 79 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 NDUFS7O75251 213 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 CLPSL1A2RUU4 121 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 NDUFA11Q86Y39 141 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 TMEM243Q9BU79 118 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
SHPRH-205ENST00000433355 TRGV2A0A075B6R0 118 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 A0A1B0GWB2 263 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 IGLL1P15814 213 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 ZFAND6Q6FIF0 208 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 STHQ8IWL8 128 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 GTSF1Q8WW33 167 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 A0A0C4DFX4 3053 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 TRBV7-6A0A0J9YX20 115 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 K7EQD1 137 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 LYPD2Q6UXB3 125 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 HILS1P60008 231 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 DEFB113Q30KQ7 82 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 TIMM8BQ9Y5J9 83 aaPredicted RBP2.86□□□□□ -1.95
SHPRH-205ENST00000433355 MED19A0JLT2 244 aaPredicted RBP2.86□□□□□ -1.95
SHPRH-205ENST00000433355 CEND1Q8N111 149 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 ADAMTSL5Q6ZMM2 481 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 PLA2G2EQ9NZK7 142 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 ZNF581Q9P0T4 197 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 IGKV2D-26A0A0A0MRZ7 120 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 IGHV3-72A0A0B4J1Y9 119 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 ANKRD29Q8N6D5 301 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 LAMTOR3Q9UHA4 124 aa2.86□□□□□ -1.95
SHPRH-205ENST00000433355 RPL37AP8A6NKH3 93 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 MALP21145 153 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 POLR2KP53803 58 aaKnown RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 Q6YL49 198 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 FAM19A2Q8N3H0 131 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 C14orf178Q8N769 122 aaPredicted RBP2.85□□□□□ -1.95
SHPRH-205ENST00000433355 TMEM213A2RRL7 107 aa2.85□□□□□ -1.95
SHPRH-205ENST00000433355 GATA2P23769 480 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms