RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
UBE4A-202ENST00000431736 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 PRSS1P07477 247 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 ARMS2P0C7Q2 107 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 MIAQ16674 131 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 MRAP2Q96G30 205 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 DNAJC30Q96LL9 226 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 VAX2Q9UIW0 290 aa3.27□□□□□ -1.89
UBE4A-202ENST00000431736 C1QBP02746 253 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 HERVK_113P61574 105 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 TMEM75Q8N9X5 138 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 OR10G8Q8NGN5 311 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 MRPL36Q9P0J6 103 aaKnown RBP3.26□□□□□ -1.89
UBE4A-202ENST00000431736 CRYBA4P53673 196 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 CD300CQ08708 224 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 PDZD2O15018 2839 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 TRAV1-1A0A0B4J248 108 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 A4D1N5 150 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 SLC17A3O00476 420 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 Q6AWC8 147 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 GEMIN7Q9H840 131 aaKnown RBP3.26□□□□□ -1.89
UBE4A-202ENST00000431736 LINC00588Q9Y4M8 146 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 IGHV3-64A0A075B6Q5 118 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 C20orf173Q96LM9 149 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 DMRT1Q9Y5R6 373 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 ARL2-SNX15V9GYD0 113 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 NIPBLQ6KC79 2804 aaeCLIP3.26□□□□□ -1.89
UBE4A-202ENST00000431736 IGLV2-8P01709 118 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 XGP55808 180 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 SUMO2P61956 95 aaKnown RBP3.26□□□□□ -1.89
UBE4A-202ENST00000431736 C4orf48Q5BLP8 95 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 ZFP2Q6ZN57 461 aa3.26□□□□□ -1.89
UBE4A-202ENST00000431736 MT-ND6P03923 174 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 CKS2P33552 79 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 BRWD1-AS2P59051 145 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 RTL8CO15255 209 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 TIRAPP58753 221 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 CKS1BP61024 79 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 Q1RN00 199 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 SEC11CQ9BY50 192 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 V9GYH0 126 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 MAP1AP78559 2803 aaPredicted RBP3.25□□□□□ -1.89
UBE4A-202ENST00000431736 OTOGQ6ZRI0 2925 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 TRBV7-3A0A075B6L6 115 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 SH2D1AO60880 128 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 DEFB104AQ8WTQ1 72 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 LECT2O14960 151 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 GNRH2O43555 120 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 TYMSP04818 313 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 OR5AL1P0C617 328 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 RPL37AP61513 92 aaKnown RBP3.25□□□□□ -1.89
UBE4A-202ENST00000431736 KLK9Q2XQG4 91 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 MRPL54Q6P161 138 aaKnown RBP3.25□□□□□ -1.89
UBE4A-202ENST00000431736 C17orf77Q96MU5 243 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 MARVELD1Q9BSK0 173 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 NAT8Q9UHE5 227 aa3.25□□□□□ -1.89
UBE4A-202ENST00000431736 CELSR2Q9HCU4 2923 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 TRAV8-4A0A0B4J246 113 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 H3BQ15 152 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 LYPD5Q6UWN5 251 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 ZNF479Q96JC4 524 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 TNFRSF6BO95407 300 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 FHITP49789 147 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 ESRGQ1W209 222 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 COX19Q49B96 90 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 RASL11AQ6T310 242 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 ZNF575Q86XF7 245 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 RNASE8Q8TDE3 154 aaKnown RBP3.24□□□□□ -1.89
UBE4A-202ENST00000431736 BAALCQ8WXS3 180 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 SLC25A2Q9BXI2 301 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 SCGB1D1O95968 90 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 HINT1P49773 126 aaPredicted RBP3.24□□□□□ -1.89
UBE4A-202ENST00000431736 RPL18AQ02543 176 aaKnown RBP3.24□□□□□ -1.89
UBE4A-202ENST00000431736 FAM74A3Q4VXF1 159 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 RBM38Q9H0Z9 239 aaKnown RBP3.24□□□□□ -1.89
UBE4A-202ENST00000431736 TOMM7Q9P0U1 55 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 TRBV20OR9-2A0A075B6H5 130 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 PRAC2D3DTV9 90 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 NDUFB4O95168 129 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 C14orf178Q8N769 122 aaPredicted RBP3.24□□□□□ -1.89
UBE4A-202ENST00000431736 CAMK2N2Q96S95 79 aa3.24□□□□□ -1.89
UBE4A-202ENST00000431736 GAGE2BQ13066 116 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 GCSAMLQ5JQS6 135 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 TRAPPC1Q9Y5R8 145 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 LOC389332A0A1B0GUA5 103 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 HMSDA8MTL9 139 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 STAG3L2P0CL84 134 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 IFI27P40305 119 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-202ENST00000431736 LAGE3Q14657 143 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 ZNF506Q5JVG8 444 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 Q6ZNX1 250 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 P0C879 139 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 PGLYRP4Q96LB8 373 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 FAM231BA6NCW3 169 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 IGLC2P0DOY2 106 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 PRR20EP86478 221 aa3.23□□□□□ -1.89
UBE4A-202ENST00000431736 PRR20CP86479 221 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms